Lines Matching refs:ijpi
42 int **ijpi, int **ijpj, int *off1pt, int *off2pt, int endi, int endj ) in gentracking() argument
70 ifi = ( ijpi[iin][jin] ); in gentracking()
93 if( ijpi[ifi][jfi] == localstop ) break; in gentracking()
107 ifi = ( ijpi[iin][jin] ); in gentracking()
112 if( ijpi[ifi][jfi] == localstop ) break; in gentracking()
150 static int **ijpi; in suboptalign11() local
310 ijpi = commonIP; in suboptalign11()
416 ijpipt = ijpi[i] + 1; in suboptalign11()
628 ijpi[i][0] = localstop; in suboptalign11()
634 ijpi[0][j] = localstop; in suboptalign11()
644 …resf = gentracking( used, seq1, seq2, mseq1, mseq2, cpmx1, cpmx2, ijpi, ijpj, off1pt, off2pt, shur… in suboptalign11()