Lines Matching refs:nTaxa
564 int i, j, nTaxa; in AddTreeToPartitionCounters() local
568 nTaxa = tree->nNodes - tree->nIntNodes - 1; in AddTreeToPartitionCounters()
570 nTaxa = tree->nNodes - tree->nIntNodes; in AddTreeToPartitionCounters()
572 for (i=0; i<nTaxa; i++) in AddTreeToPartitionCounters()
2133 int i, j, n, nTaxa, nLongsNeeded; in CopyTrees() local
2148 nTaxa = from->nNodes - from->nIntNodes; in CopyTrees()
2150 nTaxa = from->nNodes - from->nIntNodes - 1; in CopyTrees()
2151 nLongsNeeded = (int)((nTaxa - 1) / nBitsInALong) + 1; in CopyTrees()
15228 int i, j, nTaxa; in RemoveTreeFromPartitionCounters() local
15232 nTaxa = tree->nNodes - tree->nIntNodes - 1; in RemoveTreeFromPartitionCounters()
15234 nTaxa = tree->nNodes - tree->nIntNodes; in RemoveTreeFromPartitionCounters()
15236 for (i=0; i<nTaxa; i++) in RemoveTreeFromPartitionCounters()