util/sequtil/sequtil_convert_imp.hpp

51     static SIZE_TYPE Convert  in Convert()
73     static SIZE_TYPE Convert(const char* src, TCoding src_coding,
80     static SIZE_TYPE Subseq  in Subseq()
99     static SIZE_TYPE Subseq(const char* src, TCoding coding,
106     static SIZE_TYPE Pack  in Pack()
122         SIZE_TYPE res = Pack(&*src.begin(), length, src_coding,   in Pack()
134     static SIZE_TYPE Pack(const char* src, TSeqPos length, TCoding src_coding,
138     static SIZE_TYPE Pack  in Pack()
152     static SIZE_TYPE Pack(const char* src, TSeqPos length, TCoding src_coding,
162     static SIZE_TYPE x_ConvertIupacnaToIupacna(const char* src, TSeqPos pos,
164     static SIZE_TYPE x_ConvertIupacnaTo2na(const char* src, TSeqPos pos,
166     static SIZE_TYPE x_ConvertIupacnaTo2naExpand(const char* src, TSeqPos pos,
168     static SIZE_TYPE x_ConvertIupacnaTo4na(const char* src, TSeqPos pos,
170     static SIZE_TYPE x_ConvertIupacnaTo8na(const char* src, TSeqPos pos,
174     static SIZE_TYPE x_Convert2naToIupacna(const char* src, TSeqPos pos,
176     static SIZE_TYPE x_Convert2naTo2naExpand(const char* src, TSeqPos pos,
178     static SIZE_TYPE x_Convert2naTo4na(const char* src, TSeqPos pos,
180     static SIZE_TYPE x_Convert2naTo8na(const char* src, TSeqPos pos,
184     static SIZE_TYPE x_Convert2naExpandToIupacna(const char* src, TSeqPos pos,
186     static SIZE_TYPE x_Convert2naExpandTo2na(const char* src, TSeqPos pos,
188     static SIZE_TYPE x_Convert2naExpandTo4na(const char* src, TSeqPos pos,
190     static SIZE_TYPE x_Convert2naExpandTo8na(const char* src, TSeqPos pos,
194     static SIZE_TYPE x_Convert4naToIupacna(const char* src, TSeqPos pos,
196     static SIZE_TYPE x_Convert4naTo2na(const char* src, TSeqPos pos,
198     static SIZE_TYPE x_Convert4naTo2naExpand(const char* src, TSeqPos pos,
200     static SIZE_TYPE x_Convert4naTo8na(const char* src, TSeqPos pos,
204     static SIZE_TYPE x_Convert8naToIupacna(const char* src, TSeqPos pos,
206     static SIZE_TYPE x_Convert8naTo2na(const char* src, TSeqPos pos,
208     static SIZE_TYPE x_Convert8naTo2naExpand(const char* src, TSeqPos pos,
210     static SIZE_TYPE x_Convert8naTo4na(const char* src, TSeqPos pos,
216     static SIZE_TYPE x_ConvertIupacaaToEaa(const char* src, TSeqPos pos,
218     static SIZE_TYPE x_ConvertIupacaaToStdaa(const char* src, TSeqPos pos,
222     static SIZE_TYPE x_ConvertEaaToIupacaa(const char* src, TSeqPos pos,
224     static SIZE_TYPE x_ConvertEaaToStdaa(const char* src, TSeqPos pos,
228     static SIZE_TYPE x_ConvertStdaaToIupacaa(const char* src, TSeqPos pos,
230     static SIZE_TYPE x_ConvertStdaaToEaa(const char* src, TSeqPos pos,
256         SIZE_TYPE Pack(const char* src, TSeqPos length);
282             SIZE_TYPE cost;