266         if ( type==BCF_HL_FMT || type==BCF_HL_INFO || type==BCF_HL_FMT || type== BCF_HL_CTG )  in remove_hdr_lines()
272                 if ( type==BCF_HL_FMT && !strcmp(hrec->vals[id],"GT") ) { i++; continue; }  in remove_hdr_lines()
316         else if ( !strncasecmp("FORMAT/",ss,7) ) { type = BCF_HL_FMT; ss += 7; }  in init_remove_annots()
317         else if ( !strncasecmp("FMT/",ss,4) ) { type = BCF_HL_FMT; ss += 4; }  in init_remove_annots()
321         else if ( !strncasecmp("^FORMAT/",ss,8) ) { type = BCF_HL_FMT; ss += 8; keep_fmt = 1; }  in init_remove_annots()
322         else if ( !strncasecmp("^FMT/",ss,5) ) { type = BCF_HL_FMT; ss += 5; keep_fmt = 1; }  in init_remove_annots()
371                 else if ( type==BCF_HL_FMT ) tag->handler = remove_format_tag;  in init_remove_annots()
373             else if ( (type==BCF_HL_FMT && keep_fmt) || (type==BCF_HL_INFO && keep_info) )  in init_remove_annots()
388                 else if ( type==BCF_HL_FMT ) tag->handler = remove_format_tag;  in init_remove_annots()
408             if ( !args->keep_sites ) remove_hdr_lines(args->hdr_out,BCF_HL_FMT);  in init_remove_annots()
414 …if ( bcf_hdr_idinfo_exists(args->hdr,BCF_HL_FMT,id) ) error("Error: did you mean FORMAT/%s?\n",str…  in init_remove_annots()
435 …       if ( hrec->type!=BCF_HL_FLT && hrec->type!=BCF_HL_INFO && hrec->type!=BCF_HL_FMT ) continue;  in init_remove_annots()
438             if ( !keep_fmt && hrec->type==BCF_HL_FMT ) continue;  in init_remove_annots()
451             else if ( hrec->type==BCF_HL_FMT ) tag->handler = remove_format_tag;  in init_remove_annots()
2352                 if ( hrec->type!=BCF_HL_FMT) continue;  in init_columns()
2375                     switch ( bcf_hdr_id2type(args->hdr_out,BCF_HL_FMT,hdr_id) )  in init_columns()
2380 …or("The type of %s not recognised (%d)\n", str.s,bcf_hdr_id2type(args->hdr_out,BCF_HL_FMT,hdr_id));  in init_columns()
2383                 col->number = bcf_hdr_id2length(tgts_hdr,BCF_HL_FMT,hdr_id);  in init_columns()
2402 …bcf_hrec_t *hrec = bcf_hdr_get_hrec(args->files->readers[1].header, BCF_HL_FMT, "ID", key_src, NUL…  in init_columns()
2411             if ( !bcf_hdr_idinfo_exists(args->hdr_out,BCF_HL_FMT,hdr_id) )  in init_columns()
2432                 switch ( bcf_hdr_id2type(args->hdr_out,BCF_HL_FMT,hdr_id) )  in init_columns()
2437 …or("The type of %s not recognised (%d)\n", str.s,bcf_hdr_id2type(args->hdr_out,BCF_HL_FMT,hdr_id));  in init_columns()
2443                 col->number = bcf_hdr_id2length(tgts_hdr,BCF_HL_FMT,hdr_id);  in init_columns()
2520 …plicit_src_info==0 && bcf_hdr_get_hrec(args->files->readers[1].header, BCF_HL_FMT, "ID", key_src, …  in init_columns()
2703         else if ( !strncasecmp("format/",map[i],7) ) type = BCF_HL_FMT, sb = map[i] + 7;  in rename_annots()
2704         else if ( !strncasecmp("fmt/",map[i],4) ) type = BCF_HL_FMT, sb = map[i] + 4;  in rename_annots()