Lines Matching refs:prevCell

179                       DPCell_<TScoreValue, DynamicGaps> const & prevCell,  in SEQAN_FUNC_ENABLE_IF()
186 if(!isGapExtension(prevCell, DynamicGapExtensionHorizontal())) in SEQAN_FUNC_ENABLE_IF()
187 activeCell._score = _scoreOfCell(prevCell) + scoreGapOpenHorizontal(score, valH, valV); in SEQAN_FUNC_ENABLE_IF()
194 DPCell_<TScoreValue, DynamicGaps> const & prevCell, in SEQAN_FUNC_ENABLE_IF()
201 …activeCell._score = blend(_scoreOfCell(prevCell) + scoreGapOpenHorizontal(score, valH, valV), acti… in SEQAN_FUNC_ENABLE_IF()
202 isGapExtension(prevCell, DynamicGapExtensionHorizontal())); in SEQAN_FUNC_ENABLE_IF()
209 DPCell_<TScoreValue, DynamicGaps> const & prevCell, in SEQAN_FUNC_ENABLE_IF()
216 if (!isGapExtension(prevCell, DynamicGapExtensionHorizontal())) in SEQAN_FUNC_ENABLE_IF()
218 activeCell._score = _scoreOfCell(prevCell) + scoreGapOpenHorizontal(score, valH, valV); in SEQAN_FUNC_ENABLE_IF()
227 DPCell_<TScoreValue, DynamicGaps> const & prevCell, in SEQAN_FUNC_ENABLE_IF()
234 …activeCell._score = blend(_scoreOfCell(prevCell) + scoreGapOpenHorizontal(score, valH, valV), acti… in SEQAN_FUNC_ENABLE_IF()
235 isGapExtension(prevCell, DynamicGapExtensionHorizontal())); in SEQAN_FUNC_ENABLE_IF()
246 DPCell_<TScoreValue, DynamicGaps> const & prevCell, in SEQAN_FUNC_ENABLE_IF()
253 if(!isGapExtension(prevCell, DynamicGapExtensionVertical())) in SEQAN_FUNC_ENABLE_IF()
254 activeCell._score = _scoreOfCell(prevCell) + scoreGapOpenVertical(score, valH, valV); in SEQAN_FUNC_ENABLE_IF()
261 DPCell_<TScoreValue, DynamicGaps> const & prevCell, in SEQAN_FUNC_ENABLE_IF()
268 …activeCell._score = blend(_scoreOfCell(prevCell) + scoreGapOpenVertical(score, valH, valV), active… in SEQAN_FUNC_ENABLE_IF()
269 isGapExtension(prevCell, DynamicGapExtensionVertical())); in SEQAN_FUNC_ENABLE_IF()
276 DPCell_<TScoreValue, DynamicGaps> const & prevCell, in SEQAN_FUNC_ENABLE_IF()
283 if (!isGapExtension(prevCell, DynamicGapExtensionVertical())) in SEQAN_FUNC_ENABLE_IF()
285 activeCell._score = _scoreOfCell(prevCell) + scoreGapOpenVertical(score, valH, valV); in SEQAN_FUNC_ENABLE_IF()
294 DPCell_<TScoreValue, DynamicGaps> const & prevCell, in SEQAN_FUNC_ENABLE_IF()
301 auto cmp = isGapExtension(prevCell, DynamicGapExtensionVertical()); in SEQAN_FUNC_ENABLE_IF()
302 …activeCell._score = blend(_scoreOfCell(prevCell) + scoreGapOpenVertical(score, valH, valV), active… in SEQAN_FUNC_ENABLE_IF()