Lines Matching refs:coverage2
759 uint32_t * coverage2 = ( uint32_t * )calloc( slice3_len, sizeof * coverage2 ); in TEST_CASE() local
772 rc = calc_coverage_using_ref_iter( ACC3, ACC3_REF, slice3_start, slice3_len, coverage2 ); in TEST_CASE()
778 if ( coverage1[ pos ] != coverage2[ pos ] ) in TEST_CASE()
780 …cout << ( slice3_start + pos ) << " : " << coverage1[ pos ] << " , " << coverage2[ pos ] << std::e… in TEST_CASE()
789 if ( coverage2[ pos ] >= max_depth ) in TEST_CASE()
792 depths2[ coverage2[ pos ] ] += 1; in TEST_CASE()
813 free( ( void * ) coverage2 ); in TEST_CASE()
828 uint32_t * coverage2 = ( uint32_t * )calloc( slice3_len, sizeof * coverage2 ); in TEST_CASE() local
841 calc_coverage_using_ngs( ACC3, ACC3_REF, slice3_start, slice3_len, coverage2 ); in TEST_CASE()
846 if ( coverage1[ pos ] != coverage2[ pos ] ) in TEST_CASE()
848 …cout << ( slice3_start + pos ) << " : " << coverage1[ pos ] << " , " << coverage2[ pos ] << std::e… in TEST_CASE()
857 if ( coverage2[ pos ] >= max_depth ) in TEST_CASE()
860 depths2[ coverage2[ pos ] ] += 1; in TEST_CASE()
881 free( ( void * ) coverage2 ); in TEST_CASE()