Lines Matching refs:clusterinfo

74 static clusterinfo_t * clusterinfo = nullptr;  variable
900 clusterinfo[target].clusterno, in cluster_core_parallel()
908 clusterinfo[myseqno].seqno = myseqno; in cluster_core_parallel()
909 clusterinfo[myseqno].clusterno = clusterinfo[target].clusterno; in cluster_core_parallel()
910 clusterinfo[myseqno].cigar = best->nwalignment; in cluster_core_parallel()
911 clusterinfo[myseqno].strand = best->strand; in cluster_core_parallel()
922 clusterinfo[myseqno].seqno = myseqno; in cluster_core_parallel()
923 clusterinfo[myseqno].clusterno = clusters; in cluster_core_parallel()
924 clusterinfo[myseqno].cigar = nullptr; in cluster_core_parallel()
925 clusterinfo[myseqno].strand = 0; in cluster_core_parallel()
1042 clusterinfo[target].clusterno, in cluster_core_serial()
1048 clusterinfo[seqno].seqno = seqno; in cluster_core_serial()
1049 clusterinfo[seqno].clusterno = clusterinfo[target].clusterno; in cluster_core_serial()
1050 clusterinfo[seqno].cigar = best->nwalignment; in cluster_core_serial()
1051 clusterinfo[seqno].strand = best->strand; in cluster_core_serial()
1056 clusterinfo[seqno].seqno = seqno; in cluster_core_serial()
1057 clusterinfo[seqno].clusterno = clusters; in cluster_core_serial()
1058 clusterinfo[seqno].cigar = nullptr; in cluster_core_serial()
1059 clusterinfo[seqno].strand = 0; in cluster_core_serial()
1258 clusterinfo = (clusterinfo_t *) xmalloc(seqcount * sizeof(clusterinfo_t)); in cluster()
1294 int seqno = clusterinfo[i].seqno; in cluster()
1295 int clusterno = clusterinfo[i].clusterno; in cluster()
1336 qsort(clusterinfo, seqcount, sizeof(clusterinfo_t), in cluster()
1339 qsort(clusterinfo, seqcount, sizeof(clusterinfo_t), in cluster()
1360 int seqno = clusterinfo[i].seqno; in cluster()
1361 int clusterno = clusterinfo[i].clusterno; in cluster()
1525 int clusterno = clusterinfo[i].clusterno; in cluster()
1526 int seqno = clusterinfo[i].seqno; in cluster()
1527 char * cigar = clusterinfo[i].cigar; in cluster()
1528 int strand = clusterinfo[i].strand; in cluster()
1590 if (clusterinfo[i].cigar) { in cluster()
1591 xfree(clusterinfo[i].cigar); in cluster()
1597 xfree(clusterinfo); in cluster()