Lines Matching refs:pairIndex

39   int pairIndex = nBonds_;  in reset()  local
49 pairMap_[pair_ij] = pairIndex; in reset()
50 pairIndex++; in reset()
54 nPairs_ = pairIndex; in reset()
103 int pairIndex = apair.second; in reset() local
112 quantity_(pairIndex,0)=-delx*delx*fforce; in reset()
113 quantity_(pairIndex,1)=-dely*dely*fforce; in reset()
114 quantity_(pairIndex,2)=-delz*delz*fforce; in reset()
115 quantity_(pairIndex,3)=-delx*dely*fforce; in reset()
116 quantity_(pairIndex,4)=-delx*delz*fforce; in reset()
117 quantity_(pairIndex,5)=-dely*delz*fforce; in reset()
145 int pairIndex = apair.second; in reset() local
159 quantity_(pairIndex,0)=-delx*fforce*delX; in reset()
160 quantity_(pairIndex,1)=-delx*fforce*delY; in reset()
161 quantity_(pairIndex,2)=-delx*fforce*delZ; in reset()
162 quantity_(pairIndex,3)=-dely*fforce*delX; in reset()
163 quantity_(pairIndex,4)=-dely*fforce*delY; in reset()
164 quantity_(pairIndex,5)=-dely*fforce*delZ; in reset()
165 quantity_(pairIndex,6)=-delz*fforce*delX; in reset()
166 quantity_(pairIndex,7)=-delz*fforce*delY; in reset()
167 quantity_(pairIndex,8)=-delz*fforce*delZ; in reset()
195 int pairIndex = apair.second; in reset() local
206 quantity_(pairIndex,0)=fforce*delx; in reset()
207 quantity_(pairIndex,1)=fforce*dely; in reset()
208 quantity_(pairIndex,2)=fforce*delz; in reset()
232 int pairIndex = apair.second; in reset() local
248 quantity_(pairIndex,0)=fforce*delX; in reset()
249 quantity_(pairIndex,1)=fforce*delY; in reset()
250 quantity_(pairIndex,2)=fforce*delZ; in reset()
305 int pairIndex = apair.second; in reset() local
306 quantity_.add(I,pairIndex,bondValue); in reset()
348 int pairIndex = apair.second; in reset() local
362 quantity_.add(Inode,pairIndex,val); in reset()