https://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/align.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/base.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/contacts.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/density.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/diffusionmap.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/dihedrals.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/distances.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/encore.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/encore/bootstrap.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/encore/clustering.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/encore/confdistmatrix.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/encore/covariance.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/encore/dimensionality_reduction.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/encore/similarity.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/encore/utils.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/gnm.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/hbond_analysis.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/hbond_autocorrel.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/helanal.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/hole.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/leaflet.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/legacy/x3dna.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/legacy_modules.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/lineardensity.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/nuclinfo.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/pca.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/polymer.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/psa.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/rdf.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/rms.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/waterdynamics.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis/wbridge_analysis.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/analysis_modules.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/auxiliary/XVG.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/auxiliary/base.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/auxiliary/core.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/auxiliary/init.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/auxiliary_modules.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/CRD.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/DCD.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/DLPoly.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/DMS.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/GMS.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/GRO.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/GSD.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/INPCRD.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/LAMMPS.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/MMTF.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/MOL2.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/PDB.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/PDBQT.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/PQR.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/TRJ.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/TRR.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/TRZ.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/TXYZ.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/XDR.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/XTC.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/XYZ.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/base.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/chain.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/core.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/dummy.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/init.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/memory.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates/null.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/coordinates_modules.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/core/groups.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/core/init.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/core/selection.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/core/topology.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/core/topologyattrs.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/core/topologyobjects.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/core/universe.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/core_modules.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/exceptions.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/NeighborSearch.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/c_distances.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/c_distances_openmp.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/distances.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/formats/libdcd.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/formats/libmdaxdr.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/log.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/mdamath.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/qcprot.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/transformations.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib/util.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/lib_modules.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/overview.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/references.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/selections.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/selections/base.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/selections/charmm.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/selections/gromacs.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/selections/jmol.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/selections/pymol.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/selections/vmd.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/selections_modules.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/CRDParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/DLPolyParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/DMSParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/ExtendedPDBParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/GMSParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/GROParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/HoomdXMLParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/LAMMPSParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/MMTFParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/MOL2Parser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/MinimalParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/PDBParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/PDBQTParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/PQRParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/PSFParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/TOPParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/TPRParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/TXYZParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/XYZParser.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/base.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/core.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/guessers.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/init.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/tables.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology/tpr_util.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/topology_modules.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/trajectory_transformations.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/transformations/rotate.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/transformations/translate.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/units.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/version.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/visualization/streamlines.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/visualization/streamlines_3D.htmlhttps://www.mdanalysis.org/mdanalysis/documentation_pages/visualization_modules.htmlhttps://www.mdanalysis.org/mdanalysis/index.htmlhttps://www.mdanalysis.org/mdanalysis/genindex.htmlhttps://www.mdanalysis.org/mdanalysis/py-modindex.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/align.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/base.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/contacts.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/density.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/diffusionmap.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/dihedrals.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/distances.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/bootstrap.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/clustering/ClusterCollection.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/clustering/ClusteringMethod.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/clustering/cluster.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/confdistmatrix.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/covariance.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/dimensionality_reduction/DimensionalityReductionMethod.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/dimensionality_reduction/reduce_dimensionality.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/similarity.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/encore/utils.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/gnm.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/hbonds/hbond_analysis.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/hbonds/hbond_autocorrel.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/hbonds/wbridge_analysis.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/helanal.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/hole.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/leaflet.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/legacy/x3dna.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/lineardensity.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/nuclinfo.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/pca.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/polymer.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/psa.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/rdf.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/rms.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/analysis/waterdynamics.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/auxiliary/XVG.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/auxiliary/base.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/auxiliary/core.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/CRD.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/DCD.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/DLPoly.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/DMS.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/GMS.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/GRO.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/GSD.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/INPCRD.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/LAMMPS.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/MMTF.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/MOL2.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/PDB.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/PDBQT.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/PQR.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/TRJ.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/TRR.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/TRZ.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/TXYZ.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/XDR.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/XTC.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/XYZ.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/base.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/chain.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/core.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/dummy.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/memory.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/coordinates/null.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/core/__init__.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/core/_get_readers.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/core/groups.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/core/selection.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/core/topology.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/core/topologyattrs.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/core/topologyobjects.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/core/universe.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/exceptions.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/lib/NeighborSearch.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/lib/distances.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/lib/log.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/lib/mdamath.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/lib/transformations.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/lib/util.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/selections.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/selections/base.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/selections/charmm.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/selections/gromacs.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/selections/jmol.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/selections/pymol.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/selections/vmd.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/CRDParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/DMSParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/ExtendedPDBParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/GMSParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/GROParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/HoomdXMLParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/LAMMPSParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/MMTFParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/MOL2Parser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/MinimalParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/PDBParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/PDBQTParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/PQRParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/PSFParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/TOPParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/TPRParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/TXYZParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/XYZParser.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/base.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/guessers.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/tables.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/tpr/obj.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/topology/tpr/utils.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/transformations/rotate.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/units.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/visualization/streamlines.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/MDAnalysis/visualization/streamlines_3D.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/builtins.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/gridData/core.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/numpy.htmlhttps://www.mdanalysis.org/mdanalysis/_modules/index.htmlhttps://www.mdanalysis.org/mdanalysis/search.htmlhttps://www.mdanalysis.org/mdanalysis/opensearch.html