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Searched defs:MultiDeBruijnVertex (Results 1 – 3 of 3) sorted by relevance

/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/readthreading/
H A DMultiDeBruijnVertex.java12 public final class MultiDeBruijnVertex extends BaseVertex { class
31 public MultiDeBruijnVertex(final byte[] sequence, final boolean mergeIdenticalNodes) { in MultiDeBruijnVertex() method in MultiDeBruijnVertex
43 public MultiDeBruijnVertex(final byte[] sequence) { in MultiDeBruijnVertex() method in MultiDeBruijnVertex
H A DReadThreadingGraph.java50 …rotected ReadThreadingGraph(final int kmerSizeFromString, final EdgeFactory<MultiDeBruijnVertex, M… in ReadThreadingGraph()
H A DAbstractReadThreadingGraph.java72 …AbstractReadThreadingGraph(int kmerSize, EdgeFactory<MultiDeBruijnVertex, MultiSampleEdge> edgeFac… in AbstractReadThreadingGraph()
786 … final Function<MultiDeBruijnVertex, MultiSampleEdge> nextEdge, in findPath()