Searched defs:RazerSOptions (Results 1 – 6 of 6) sorted by relevance
50 struct RazerSOptions struct53 TSpec spec;85 int threshold; // threshold97 unsigned char compMask[5];107 bool maqMapping;108 int maxMismatchQualSum;109 int mutationRateQual;110 int absMaxQualSumErrors;111 unsigned artSeedLength;112 bool noBelowIdentity;[all …]
57 struct RazerSOptions struct60 TSpec spec;115 bool maqMapping;117 int mutationRateQual;119 unsigned artSeedLength;120 bool noBelowIdentity;125 bool microRNA;127 bool exactSeed;132 int minClippedLen;136 int maxReadLength;[all …]
55 struct RazerSOptions struct58 TSpec spec;111 bool maqMapping;112 int maxMismatchQualSum;113 int mutationRateQual;115 unsigned artSeedLength;116 bool noBelowIdentity;120 bool microRNA;121 unsigned rnaSeedLength;122 bool exactSeed;[all …]
55 struct RazerSOptions struct58 TSpec spec;111 bool maqMapping;113 int mutationRateQual;115 unsigned artSeedLength;116 bool noBelowIdentity;120 bool microRNA;121 unsigned rnaSeedLength;122 bool exactSeed;127 int minClippedLen;[all …]
62 struct RazerSOptions struct65 TSpec spec;121 bool maqMapping;123 int mutationRateQual;125 unsigned artSeedLength;126 bool noBelowIdentity;130 bool microRNA;131 unsigned rnaSeedLength;132 bool exactSeed;137 int minClippedLen;[all …]
374 struct RazerSOptions : RazerSCoreOptions<TSpec> struct376 typedef RazerSCoreOptions<TSpec> TCoreOptions;377 … // left read's SeqFile (we have to keep it open and store it here to stream it only once)