/dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/index/ |
H A D | test_find_backtracking.h | 56 testFinder(FinderTester<TText, TPattern, TSpec> & tester, Finder_<TText, TPattern, TFinderSpec> con… in testFinder() argument 79 testFinder(FinderTester<TText, Index<TPattern, TPatternIndexSpec>, TSpec> & tester, in testFinder() 114 typedef StringSet<CharString> TPattern; typedef 130 typedef StringSet<CharString> TPattern; in SEQAN_DEFINE_TEST() typedef 177 typedef StringSet<CharString> TPattern; in SEQAN_DEFINE_TEST() typedef 221 typedef CharString TPattern; in SEQAN_DEFINE_TEST() typedef 255 typedef CharString TPattern; in SEQAN_DEFINE_TEST() typedef
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H A D | test_find_base.h | 120 addSolution(FinderTester<TText, TPattern, TSpec> & tester, TTextOcc textOcc, TPatternOcc patternOcc… in addSolution() argument 134 addResult(FinderTester<TText, TPattern, TSpec> & tester, TTextOcc textOcc, TPatternOcc patternOcc, … in addResult() argument 148 test(FinderTester<TText, TPattern, TSpec> & tester) in test() argument
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/dports/biology/seqan1/seqan-1.3.1/demos/howto/ |
H A D | filter_similar_sequences.cpp | 21 typedef Pattern<TIndex, Swift<SwiftSemiGlobal> > TPattern; in main() typedef
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/demos/howto/ |
H A D | filter_similar_sequences.cpp | 25 typedef Pattern<TIndex, Swift<SwiftSemiGlobal> > TPattern; in main() typedef
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/demos/tutorial/journaled_string_tree/ |
H A D | journaled_string_tree_base.cpp | 34 typedef Pattern<DnaString, Horspool> TPattern; in main() typedef
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H A D | journaled_string_tree_base_assignment1.cpp | 29 typedef Pattern<DnaString, MyersUkkonen> TPattern; in main() typedef
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/dports/biology/seqan1/seqan-1.3.1/seqan/find/ |
H A D | find_horspool.h | 145 typedef Pattern<TNeedle2, Horspool> TPattern; in _findHorspool() typedef 310 typedef Pattern<TNeedle2, Horspool> TPattern; in _findHorspool() typedef
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H A D | find_wumanber.h | 128 typedef Pattern<TNeedle, WuManber> TPattern; typedef
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/dports/biology/seqan/seqan-library-2.4.0/include/seqan/find/ |
H A D | find_horspool.h | 139 typedef Pattern<TNeedle2, Horspool> TPattern; in _findHorspool() typedef 304 typedef Pattern<TNeedle2, Horspool> TPattern; in _findHorspool() typedef
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H A D | find_wumanber.h | 129 typedef Pattern<TNeedle, WuManber> TPattern; typedef
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/find/ |
H A D | find_horspool.h | 139 typedef Pattern<TNeedle2, Horspool> TPattern; in _findHorspool() typedef 304 typedef Pattern<TNeedle2, Horspool> TPattern; in _findHorspool() typedef
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H A D | find_wumanber.h | 129 typedef Pattern<TNeedle, WuManber> TPattern; typedef
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/find/ |
H A D | find_horspool.h | 147 typedef Pattern<TNeedle2, Horspool> TPattern; in _findHorspool() typedef 313 typedef Pattern<TNeedle2, Horspool> TPattern; in _findHorspool() typedef
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H A D | find_wumanber.h | 127 typedef Pattern<TNeedle, WuManber> TPattern; typedef
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/dports/biology/seqan1/seqan-1.3.1/demos/tutorial/read_mapping/ |
H A D | minimapper.cpp | 48 typedef Pattern<TIndex, Swift<SwiftSemiGlobal> > TPattern; typedef
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/demos/unassigned_or_unused/ |
H A D | minimapper.cpp | 50 typedef Pattern<TIndex, Swift<SwiftSemiGlobal> > TPattern; typedef
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/find/ |
H A D | test_find.cpp | 1692 typedef Pattern<CharString, TPatternSpec> TPattern; in test_pattern_copycon() typedef 1701 typedef Pattern<CharString, TPatternSpec> TPattern; in test_pattern_assign() typedef 1712 typedef Pattern<CharString, TPatternSpec> TPattern; in test_pattern_movecon() typedef 1721 typedef Pattern<CharString, TPatternSpec> TPattern; in test_pattern_moveassign() typedef 1733 typedef Pattern<DnaString, TPatternSpec> TPattern; in test_pattern_set_host() typedef
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/dports/biology/seqan1/seqan-1.3.1/apps/rabema/ |
H A D | find_approx_dp_quality.h | 150 typedef Pattern<TNeedle, QualityDpSearch<FindInfix, HasFindBeginSupport> > TPattern; in _patternInit() typedef 269 typedef Pattern<TNeedle, QualityDpSearch<TSpec, true> > TPattern; in findBegin() typedef
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/dports/graphics/povray36/povray-3.6.1/source/ |
H A D | image.cpp | 400 DBL image_pattern(VECTOR EPoint, TPATTERN *TPattern) in image_pattern() 1045 static int map(VECTOR EPoint, TPATTERN *TPattern, DBL *xcoor, DBL *ycoor) in map()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/corelib/ |
H A D | ncbidiag_p.hpp | 175 typedef vector< pair<TCode, TCode> > TPattern; typedef in CDiagStrErrCodeMatcher
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/corelib/ |
H A D | ncbidiag_p.hpp | 175 typedef vector< pair<TCode, TCode> > TPattern; typedef in CDiagStrErrCodeMatcher
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/dports/graphics/povray37/povray-3.7.0.10/source/backend/support/ |
H A D | imageutil.cpp | 374 DBL image_pattern(const VECTOR EPoint, const TPATTERN *TPattern) in image_pattern() 896 static int map_pos(const VECTOR EPoint, const TPATTERN *TPattern, DBL *xcoor, DBL *ycoor) in map_pos()
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/dports/audio/epos-devel/epos-2.5.37/src/nnet/ |
H A D | traindata.cc | 15 REGVECTOR (TPattern, TPatterns) in REGVECTOR() argument
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/dports/graphics/megapov/megapov-1.2.1/source/ |
H A D | image.cpp | 415 DBL image_pattern(VECTOR EPoint, TPATTERN *TPattern) in image_pattern() 1132 static int map(VECTOR EPoint, TPATTERN *TPattern, DBL *xcoor, DBL *ycoor) in map()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/serial/datatool/ |
H A D | traversal_spec_file_parser.hpp | 49 typedef std::vector<std::string> TPattern; typedef in CTraversalSpecFileParser
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