Searched defs:_patternSeq (Results 1 – 4 of 4) sorted by relevance
/dports/biology/ugene/ugene-40.1/src/plugins/smith_waterman/src/ |
H A D | SmithWatermanAlgorithmCUDA.cpp | 38 …rmanAlgorithmCUDA::estimateNeededGpuMemory(const SMatrix &sm, const QByteArray &_patternSeq, const… in estimateNeededGpuMemory() 47 …rmanAlgorithmCUDA::estimateNeededRamAmount(const SMatrix &sm, const QByteArray &_patternSeq, const… in estimateNeededRamAmount() 58 void SmithWatermanAlgorithmCUDA::launch(const SMatrix &sm, const QByteArray &_patternSeq, const QBy… in launch()
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H A D | SmithWatermanAlgorithmOPENCL.cpp | 57 …anAlgorithmOPENCL::estimateNeededGpuMemory(const SMatrix &sm, const QByteArray &_patternSeq, const… in estimateNeededGpuMemory() 82 …anAlgorithmOPENCL::estimateNeededRamAmount(const SMatrix &sm, const QByteArray &_patternSeq, const… in estimateNeededRamAmount() 145 void SmithWatermanAlgorithmOPENCL::launch(const SMatrix &sm, const QByteArray &_patternSeq, const Q… in launch()
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H A D | SmithWatermanAlgorithm.cpp | 97 const QByteArray &_patternSeq, in setValues() 113 const QByteArray &_patternSeq, in launch()
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H A D | SmithWatermanAlgorithmSSE2.cpp | 67 &_patternSeq, in estimateNeededRamAmount() 101 …rmanAlgorithmSSE2::launch(const SMatrix &_substitutionMatrix, const QByteArray &_patternSeq, const… in launch()
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