Searched defs:alignScript (Results 1 – 7 of 7) sorted by relevance
| /dports/biology/ncbi-toolkit/ncbi/algo/blast/core/ |
| H A D | phi_gapalign.c | 87 GapPrelimEditBlock* alignScript) in s_Align()
282 Int4 gapExtend, GapPrelimEditBlock* alignScript) in s_BandedAlign()
498 Int4 lenDbSeq, GapPrelimEditBlock *alignScript, in s_PHIBlastAlignPatterns()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/core/ |
| H A D | phi_gapalign.c | 87 GapPrelimEditBlock* alignScript) in s_Align()
282 Int4 gapExtend, GapPrelimEditBlock* alignScript) in s_BandedAlign()
498 Int4 lenDbSeq, GapPrelimEditBlock *alignScript, in s_PHIBlastAlignPatterns()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/core/ |
| H A D | phi_gapalign.c | 87 GapPrelimEditBlock* alignScript) in s_Align()
282 Int4 gapExtend, GapPrelimEditBlock* alignScript) in s_BandedAlign()
498 Int4 lenDbSeq, GapPrelimEditBlock *alignScript, in s_PHIBlastAlignPatterns()
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| /dports/biology/ncbi-toolkit/ncbi/tools/ |
| H A D | pattern1.c | 1211 Int4 gapExtend, Int4 * alignScript, data_dp * data) in ALIGN_B()
1420 Int4 lenDbSeq, Int4 *alignScript, Int4 **tback, in align_of_pattern()
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| H A D | pseed3.c | 1187 Int4 *alignScript; /*edit script that describes pairwise alignment*/ in output_hits() local
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| H A D | kappa.c | 1110 int *alignScript, *dummy; /* the alignment script that will be in Kappa_SWFindFinalEndsUsingXdrop() local
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| /dports/biology/ncbi-toolkit/ncbi/demo/ |
| H A D | profiles.c | 1000 Int4 *alignScript, *reverseAlignScript; in findMatchingProfiles() local
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