| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/ |
| H A D | CountReadsIntegrationTest.java | 92 …private void countReads(final String interval_args, final String fileName, final String referenceN… in countReads() method in CountReadsIntegrationTest
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| /dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/sqlite_dbi/assembly/ |
| H A D | RTreeAssemblyAdapter.cpp | 73 qint64 RTreeAssemblyAdapter::countReads(const U2Region &r, U2OpStatus &os) { in countReads() function in U2::RTreeAssemblyAdapter
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| H A D | SingleTableAssemblyAdapter.cpp | 109 qint64 SingleTableAssemblyAdapter::countReads(const U2Region &r, U2OpStatus &os) { in countReads() function in U2::SingleTableAssemblyAdapter
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| H A D | MultiTableAssemblyAdapter.cpp | 251 qint64 MultiTableAssemblyAdapter::countReads(const U2Region &r, U2OpStatus &os) { in countReads() function in U2::MultiTableAssemblyAdapter
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| /dports/security/vault/vault-1.8.2/vendor/github.com/apple/foundationdb/flow/ |
| H A D | SystemMonitor.h | 52 int64_t countReads; member
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| H A D | Net2.actor.cpp | 207 Int64MetricHandle countReads; member in N2::sealed
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| /dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/mysql_dbi/util/ |
| H A D | MysqlSingleTableAssemblyAdapter.cpp | 118 qint64 MysqlSingleTableAssemblyAdapter::countReads(const U2Region &r, U2OpStatus &os) { in countReads() function in U2::MysqlSingleTableAssemblyAdapter
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| H A D | MysqlMultiTableAssemblyAdapter.cpp | 111 qint64 MysqlMultiTableAssemblyAdapter::countReads(const U2Region &r, U2OpStatus &os) { in countReads() function in U2::MysqlMultiTableAssemblyAdapter
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| /dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/mysql_dbi/ |
| H A D | MysqlAssemblyDbi.cpp | 129 qint64 MysqlAssemblyDbi::countReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os) { in countReads() function in U2::MysqlAssemblyDbi
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| /dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/sqlite_dbi/ |
| H A D | SQLiteAssemblyDbi.cpp | 125 qint64 SQLiteAssemblyDbi::countReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os)… in countReads() function in U2::SQLiteAssemblyDbi
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| /dports/biology/ugene/ugene-40.1/src/plugins/dbi_bam/src/ |
| H A D | Dbi.cpp | 590 qint64 AssemblyDbi::countReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os) { in countReads() function in U2::BAM::AssemblyDbi
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| H A D | SamtoolsBasedDbi.cpp | 591 qint64 SamtoolsBasedAssemblyDbi::countReads(const U2DataId &assemblyId, const U2Region &r, U2OpStat… in countReads() function in U2::BAM::SamtoolsBasedAssemblyDbi
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| /dports/biology/bbmap/bbmap/current/jgi/ |
| H A D | ReformatReads.java | 1393 private long[] countReads(long maxReads){ in countReads() method in ReformatReads
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