Searched defs:fracchange (Results 1 – 11 of 11) sorted by relevance
| /dports/biology/iqtree/IQ-TREE-2.0.6/pll/ |
| H A D | models.c | 3264 double *fracchange, in initGeneric()
3497 *fracchange = &(pr->partitionData[model]->fracchange); in pllInitReversibleGTR() local
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| H A D | pll.h | 999 double fracchange; member
1172 double fracchange; /**< Average substitution rate */ member
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| /dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/phylip/src/ |
| H A D | dnadist.cpp | 66 freqar, freqcy, freqgr, freqty, cvi, invarfrac, sumrates, fracchange; variable
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| H A D | cons.cpp | 276 double valyew, divisor, fracchange; in initconsnode() local
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| H A D | seq.cpp | 381 double *xv, double *fracchange, boolean freqsfrom, in getbasefreqs()
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| /dports/biology/fluctuate/fluctuate1.4/ |
| H A D | fluctuate.h | 287 double fracchange; /* probability of change */ member
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| /dports/biology/fastdnaml/fastDNAml_1.2.2/source/ |
| H A D | fastDNAml.h | 114 double ttratio, xi, xv, fracchange; /* transition/transversion */ member
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| /dports/biology/recombine/recombine1.41/ |
| H A D | recombine.h | 389 double fracchange; /* probability of change */ member
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| /dports/biology/migrate/migrate-3.6.11/src/ |
| H A D | migration.h | 201 MYREAL fracchange; // member
239 MYREAL fracchange; // member
1365 MYREAL fracchange; member
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| /dports/biology/lamarc/lamarc-2.1.8/src/datalike/ |
| H A D | dlmodel.cpp | 870 double fracchange = y * (2.0 * freqa * freqgr + 2.0 * freqc * freqty) in Finalize() local
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| /dports/biology/seaview/seaview/csrc/ |
| H A D | seq.c | 375 double *xv, double *fracchange, boolean freqsfrom, in getbasefreqs()
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