Searched defs:genomeoffset (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/gmap/gmap-2020-09-12/src/ |
| H A D | dynprog_end.c | 659 int queryoffset, int genomeoffset, Pairpool_T pairpool, in traceback_nogaps()
737 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in traceback_local_8_upper()
837 int queryoffset, int genomeoffset, Pairpool_T pairpool, in traceback_local_8_lower()
932 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in traceback_local_16_upper()
1031 int queryoffset, int genomeoffset, Pairpool_T pairpool, in traceback_local_16_lower()
1126 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in traceback_local_std()
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| H A D | pairpool.c | 982 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, int dynprogindex) { in Pairpool_add_queryskip()
1085 char *genomesequence, int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in Pairpool_add_genomeskip()
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| H A D | dynprog_simd.c | 8932 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in Dynprog_traceback_8()
9089 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in Dynprog_traceback_8_upper()
9203 int queryoffset, int genomeoffset, Pairpool_T pairpool, in Dynprog_traceback_8_lower()
9312 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in Dynprog_traceback_16()
9467 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in Dynprog_traceback_16_upper()
9581 int queryoffset, int genomeoffset, Pairpool_T pairpool, in Dynprog_traceback_16_lower()
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| H A D | dynprog.c | 1726 int queryoffset, int genomeoffset, Pairpool_T pairpool, bool revp, in Dynprog_traceback_std()
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