Searched defs:het_j (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/stacks/stacks-2.4/src/ |
| H A D | gstacks.cc | 2073 for (size_t het_j=het_i+1; het_j<het_snps.size(); ++het_j) { in phase_sample_hets() local
2261 for (size_t het_j=het_i+1; het_j<het_snps.size(); ++het_j) { in assemble_phase_sets() local
2323 void PhaseSet::add_het(size_t het_i, array<Nt2,2> alleles, Nt2 nt_i, size_t het_j, Nt2 nt_j) { in add_het()
2342 void PhaseSet::merge_with(const PhaseSet& other, size_t het_i, Nt2 nt_i, size_t het_j, Nt2 nt_j) { in merge_with()
2367 bool PhaseSet::is_edge_consistent(size_t het_i, Nt2 nt_i, size_t het_j, Nt2 nt_j) const { in is_edge_consistent()
2702 for (size_t het_j=het_i+1; het_j<het_snps.size(); ++het_j) { in write_sample_hapgraph() local
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