Searched defs:locus_id (Results 1 – 9 of 9) sorted by relevance
670 AbundanceRecorder::recorder_sample_table::iterator AbundanceRecorder::find_locus(int locus_id) in find_locus()681 void AbundanceRecorder::register_locus(int locus_id) in register_locus()696 void AbundanceRecorder::abundance_avail(int locus_id, in abundance_avail()729 void AbundanceRecorder::record_tracking_data(int locus_id, vector<boost::shared_ptr<SampleAbundance… in record_tracking_data()
1113 …ed_ptr<const AbundanceGroup> PrecomputedExpressionHitFactory::get_abundance_for_locus(int locus_id) in get_abundance_for_locus()1125 void PrecomputedExpressionHitFactory::clear_abundance_for_locus(int locus_id) in clear_abundance_for_locus()1137 boost::shared_ptr<const AbundanceGroup> PrecomputedExpressionHitFactory::next_locus(int locus_id, b… in next_locus()
995 const string& locus_id = raw_compatible_counts[j].locus_desc; in normalize_counts() local1080 string& locus_id = sample_compatible_count_table[j].locus_desc; in normalize_counts() local1099 string& locus_id = sample_total_count_table[j].locus_desc; in normalize_counts() local
56 TestLauncher::launcher_sample_table::iterator TestLauncher::find_locus(const string& locus_id) in find_locus()67 void TestLauncher::register_locus(const string& locus_id) in register_locus()82 void TestLauncher::abundance_avail(const string& locus_id, in abundance_avail()
965 double get_compat_mass(int locus_id) in get_compat_mass()978 double get_total_mass(int locus_id) in get_total_mass()
196 int locus_id = -1; in next_bundle() local
2112 …ptr<const AbundanceGroup> PrecomputedExpressionBundleFactory::get_abundance_for_locus(int locus_id) in get_abundance_for_locus()2120 void PrecomputedExpressionBundleFactory::clear_abundance_for_locus(int locus_id) in clear_abundance_for_locus()
1004 LocusFilter::whitelist_filter(size_t locus_id) in whitelist_filter()1016 LocusFilter::blacklist_filter(size_t locus_id) in blacklist_filter()
1774 int sample_id, locus_id; in initialize_existing_catalog() local