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Searched defs:max_mismatches (Results 1 – 10 of 10) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/algo/blast/core/
H A Djumper.c725 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressed()
907 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressedWithTraceback()
1116 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressedWithTracebackOptimal()
1365 int max_mismatches, int window, in JumperExtendRight()
1534 int max_mismatches, int window, in JumperExtendRightWithTraceback()
1730 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressed()
1899 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressedWithTraceback()
2092 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressedWithTracebackOptimal()
2325 int max_mismatches, int window, in JumperExtendLeft()
H A Dblast_gapalign.h82 Int4 max_mismatches; /**< Max number of mismatches for jumper */ member
H A Dblast_options.h322 Int4 max_mismatches; /**< Maximum number of mismatches allowed for Jumper */ member
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/core/
H A Dblast_gapalign.h82 Int4 max_mismatches; /**< Max number of mismatches for jumper */ member
H A Dblast_options.h343 Int4 max_mismatches; /**< Maximum number of mismatches allowed for Jumper */ member
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/core/
H A Dblast_gapalign.h82 Int4 max_mismatches; /**< Max number of mismatches for jumper */ member
H A Dblast_options.h343 Int4 max_mismatches; /**< Maximum number of mismatches allowed for Jumper */ member
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/core/
H A Djumper.c738 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressed()
920 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressedWithTraceback()
1129 int max_mismatches, int window, in JumperExtendRightCompressedWithTracebackOptimal()
1388 int max_mismatches, int window, in JumperExtendRight()
1557 int max_mismatches, int window, in JumperExtendRightWithTraceback()
1753 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressed()
1922 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressedWithTraceback()
2115 int max_mismatches, int window, in JumperExtendLeftCompressedWithTracebackOptimal()
2358 int max_mismatches, int window, in JumperExtendLeft()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/core/
H A Djumper.c738 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressed()
920 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressedWithTraceback()
1129 int max_mismatches, int window, in JumperExtendRightCompressedWithTracebackOptimal()
1388 int max_mismatches, int window, in JumperExtendRight()
1557 int max_mismatches, int window, in JumperExtendRightWithTraceback()
1753 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressed()
1922 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressedWithTraceback()
2115 int max_mismatches, int window, in JumperExtendLeftCompressedWithTracebackOptimal()
2358 int max_mismatches, int window, in JumperExtendLeft()
/dports/biology/gmap/gmap-2020-09-12/src/
H A Dgenome128_hr.c5161 mismatches_left (int *mismatch_positions, int max_mismatches, Genome_T ome, Compress_T query_compre… in mismatches_left()
5422 mismatches_left_alt (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T ome_alt, in mismatches_left_alt()
5690 Genome_mismatches_left (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T ome_alt, in Genome_mismatches_left()
5722 Genome_mismatches_left_trim (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T om… in Genome_mismatches_left_trim()
5751 mismatches_right (int *mismatch_positions, int max_mismatches, Genome_T ome, Compress_T query_compr… in mismatches_right()
6012 mismatches_right_alt (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T ome_alt, in mismatches_right_alt()
6277 Genome_mismatches_right (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T ome_al… in Genome_mismatches_right()
6307 Genome_mismatches_right_trim (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T o… in Genome_mismatches_right_trim()