/dports/biology/ncbi-toolkit/ncbi/algo/blast/core/ |
H A D | jumper.c | 725 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressed() 907 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressedWithTraceback() 1116 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressedWithTracebackOptimal() 1365 int max_mismatches, int window, in JumperExtendRight() 1534 int max_mismatches, int window, in JumperExtendRightWithTraceback() 1730 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressed() 1899 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressedWithTraceback() 2092 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressedWithTracebackOptimal() 2325 int max_mismatches, int window, in JumperExtendLeft()
|
H A D | blast_gapalign.h | 82 Int4 max_mismatches; /**< Max number of mismatches for jumper */ member
|
H A D | blast_options.h | 322 Int4 max_mismatches; /**< Maximum number of mismatches allowed for Jumper */ member
|
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/core/ |
H A D | blast_gapalign.h | 82 Int4 max_mismatches; /**< Max number of mismatches for jumper */ member
|
H A D | blast_options.h | 343 Int4 max_mismatches; /**< Maximum number of mismatches allowed for Jumper */ member
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/core/ |
H A D | blast_gapalign.h | 82 Int4 max_mismatches; /**< Max number of mismatches for jumper */ member
|
H A D | blast_options.h | 343 Int4 max_mismatches; /**< Maximum number of mismatches allowed for Jumper */ member
|
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/core/ |
H A D | jumper.c | 738 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressed() 920 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressedWithTraceback() 1129 int max_mismatches, int window, in JumperExtendRightCompressedWithTracebackOptimal() 1388 int max_mismatches, int window, in JumperExtendRight() 1557 int max_mismatches, int window, in JumperExtendRightWithTraceback() 1753 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressed() 1922 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressedWithTraceback() 2115 int max_mismatches, int window, in JumperExtendLeftCompressedWithTracebackOptimal() 2358 int max_mismatches, int window, in JumperExtendLeft()
|
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/core/ |
H A D | jumper.c | 738 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressed() 920 int max_mismatches, int window, Uint4* table, in JumperExtendRightCompressedWithTraceback() 1129 int max_mismatches, int window, in JumperExtendRightCompressedWithTracebackOptimal() 1388 int max_mismatches, int window, in JumperExtendRight() 1557 int max_mismatches, int window, in JumperExtendRightWithTraceback() 1753 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressed() 1922 int max_mismatches, int window, Uint4* table, in JumperExtendLeftCompressedWithTraceback() 2115 int max_mismatches, int window, in JumperExtendLeftCompressedWithTracebackOptimal() 2358 int max_mismatches, int window, in JumperExtendLeft()
|
/dports/biology/gmap/gmap-2020-09-12/src/ |
H A D | genome128_hr.c | 5161 mismatches_left (int *mismatch_positions, int max_mismatches, Genome_T ome, Compress_T query_compre… in mismatches_left() 5422 mismatches_left_alt (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T ome_alt, in mismatches_left_alt() 5690 Genome_mismatches_left (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T ome_alt, in Genome_mismatches_left() 5722 Genome_mismatches_left_trim (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T om… in Genome_mismatches_left_trim() 5751 mismatches_right (int *mismatch_positions, int max_mismatches, Genome_T ome, Compress_T query_compr… in mismatches_right() 6012 mismatches_right_alt (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T ome_alt, in mismatches_right_alt() 6277 Genome_mismatches_right (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T ome_al… in Genome_mismatches_right() 6307 Genome_mismatches_right_trim (int *mismatch_positions, int max_mismatches, Genome_T ome, Genome_T o… in Genome_mismatches_right_trim()
|