| /dports/biology/bio-mocha/bcftools-1.14/MoCha/ |
| H A D | shift_plot.R | 36 parser <- add_option(parser, c('--cytoband'), type = 'character', help = 'cytoband file', metavar =… nameattr
37 parser <- add_option(parser, c('--vcf'), type = 'character', help = 'input VCF file', metavar = '<f… nameattr
39 parser <- add_option(parser, c('--region'), type = 'character', help = 'region to plot', metavar = … nameattr
40 …-phred'), type = 'integer', default = 10, help = 'minimum phred score [10]', metavar = '<integer>') nameattr
41 …tio'), type = 'integer', default = 25, help = 'plot to cytoband ratio [25]', metavar = '<integer>') nameattr
42 …n(parser, c('--max-height'), type = 'integer', help = 'phred score ceiling', metavar = '<integer>') nameattr
43 parser <- add_option(parser, c('--pdf'), type = 'character', help = 'output PDF file', metavar = '<… nameattr
44 parser <- add_option(parser, c('--png'), type = 'character', help = 'output PNG file', metavar = '<… nameattr
45 …type = 'integer', default = 7, help = 'inches width of the output file [7]', metavar = '<integer>') nameattr
46 …ype = 'integer', default = 7, help = 'inches height of the output file [7]', metavar = '<integer>') nameattr
[all …]
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| H A D | summary_plot.R | 35 …(parser, c('--stats'), type = 'character', help = 'input MoChA stats file', metavar = '<file.tsv>') nameattr
36 …(parser, c('--calls'), type = 'character', help = 'input MoChA calls file', metavar = '<file.tsv>') nameattr
37 … type = 'double', default = 0.97, help = 'minimum call rate threshold [0.97]', metavar = '<float>') nameattr
38 …ouble', default = 0.03, help = 'maximum BAF autocorrelation threshold [0.03]', metavar = '<float>') nameattr
39 parser <- add_option(parser, c('--pdf'), type = 'character', help = 'output PDF file', metavar = '<… nameattr
40 …type = 'integer', default = 7, help = 'inches width of the output file [7]', metavar = '<integer>') nameattr
41 …ype = 'integer', default = 7, help = 'inches height of the output file [7]', metavar = '<integer>') nameattr
42 …r, c('--fontsize'), type = 'integer', default = 16, help = 'font size [16]', metavar = '<integer>') nameattr
|
| H A D | pileup_plot.R | 35 parser <- add_option(parser, c('--cytoband'), type = 'character', help = 'cytoband file', metavar =… nameattr
36 …(parser, c('--stats'), type = 'character', help = 'input MoChA stats file', metavar = '<file.tsv>') nameattr
37 …(parser, c('--calls'), type = 'character', help = 'input MoChA calls file', metavar = '<file.tsv>') nameattr
41 … type = 'double', default = 0.97, help = 'minimum call rate threshold [0.97]', metavar = '<float>') nameattr
42 …ouble', default = 0.03, help = 'maximum BAF autocorrelation threshold [0.03]', metavar = '<float>') nameattr
43 parser <- add_option(parser, c('--pdf'), type = 'character', help = 'output PDF file', metavar = '<… nameattr
44 …type = 'integer', default = 7, help = 'inches width of the output file [7]', metavar = '<integer>') nameattr
45 …ype = 'integer', default = 7, help = 'inches height of the output file [7]', metavar = '<integer>') nameattr
46 …r, c('--fontsize'), type = 'integer', default = 16, help = 'font size [16]', metavar = '<integer>') nameattr
|
| H A D | mocha_plot.R | 37 …, c('--rules'), type = 'character', help = 'genome assembly (e.g. GRCh38)', metavar = '<assembly>') nameattr
38 parser <- add_option(parser, c('--cytoband'), type = 'character', help = 'cytoband file', metavar =… nameattr
42 …(parser, c('--stats'), type = 'character', help = 'input MoChA stats file', metavar = '<file.tsv>') nameattr
43 parser <- add_option(parser, c('--vcf'), type = 'character', help = 'input VCF file', metavar = '<f… nameattr
44 …xclude'), type = 'character', help = 'regions to exclude listed in a file', metavar = '<file.bed>') nameattr
45 parser <- add_option(parser, c('--pdf'), type = 'character', help = 'output PDF file', metavar = '<… nameattr
46 parser <- add_option(parser, c('--png'), type = 'character', help = 'output PNG file', metavar = '<… nameattr
49 …amples'), type = 'character', help = 'comma-separated list of samples to plot', metavar = '<list>') nameattr
50 …'), type = 'character', help = 'comma-separated list of regions to plot [all]', metavar = '<list>') nameattr
51 …r, c('--fontsize'), type = 'integer', default = 12, help = 'font size [12]', metavar = '<integer>') nameattr
[all …]
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| /dports/net/google-cloud-sdk/google-cloud-sdk/lib/googlecloudsdk/command_lib/anthos/ |
| H A D | flags.py | 56 help_override=None, metavar=None): argument
85 def GetPackagePathFlag(metavar=None): argument
101 help_override=None, metavar=None): argument
203 help_override=None, metavar=None): argument
251 help_override=None, metavar='OUTPUT-DIR', default=None): argument
|
| /dports/textproc/apertium/apertium-3.6.1/apertium/ |
| H A D | shell_utils.cc | 35 void try_open_fstream(const char *metavar, const char *filename, in try_open_fstream()
65 FILE *try_open_file(const char *metavar, const char *filename, in try_open_file()
76 FILE *try_open_file_utf8(const char *metavar, const char *filename, in try_open_file_utf8()
85 void try_close_file(const char *metavar, const char *filename, in try_close_file()
|
| /dports/science/xtb/xtb-6.4.1/src/ |
| H A D | metadynamic.f90 | 21 subroutine metadynamic(metavar,nat,at,xyz,ebias,g) argument
26 type(metadyn_setvar),intent(in) :: metavar local
91 subroutine load_metadynamic(metavar,nat,at,xyz) argument
97 type(metadyn_setvar),intent(inout) :: metavar local
113 subroutine load_rmsdbias(metavar,nat,at,xyz) argument
121 type(metadyn_setvar),intent(inout) :: metavar local
195 subroutine set_metadynamic(metavar,nat,at,xyz) argument
201 type(metadyn_setvar),intent(inout) :: metavar local
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| /dports/devel/efl/efl-1.25.1/src/lib/ecore/ |
| H A D | Ecore_Getopt.h | 193 const char *metavar; /**< used by ecore_getopt_help() with nargs > 0 */ member
336 #define ECORE_GETOPT_STORE_METAVAR(shortname, longname, help, metavar, type) \ argument
348 #define ECORE_GETOPT_STORE_METAVAR_STR(shortname, longname, help, metavar) \ argument
359 #define ECORE_GETOPT_STORE_METAVAR_BOOL(shortname, longname, help, metavar) \ argument
370 #define ECORE_GETOPT_STORE_METAVAR_SHORT(shortname, longname, help, metavar) \ argument
381 #define ECORE_GETOPT_STORE_METAVAR_INT(shortname, longname, help, metavar) \ argument
392 #define ECORE_GETOPT_STORE_METAVAR_LONG(shortname, longname, help, metavar) \ argument
403 #define ECORE_GETOPT_STORE_METAVAR_USHORT(shortname, longname, help, metavar) \ argument
414 #define ECORE_GETOPT_STORE_METAVAR_UINT(shortname, longname, help, metavar) \ argument
425 #define ECORE_GETOPT_STORE_METAVAR_ULONG(shortname, longname, help, metavar) \ argument
[all …]
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| /dports/net/google-cloud-sdk/google-cloud-sdk/lib/googlecloudsdk/command_lib/util/args/ |
| H A D | repeated.py | 234 metavar=None, argument
278 def _GetAppendArg(arg_name, metavar, prop_name, is_dict_args): argument
291 def _GetRemoveArg(arg_name, metavar, prop_name, is_dict_args): argument
302 def _GetSetArg(arg_name, metavar, prop_name, is_dict_args): argument
|
| /dports/games/multimc/MultiMC5-0.6.11/api/logic/ |
| H A D | Commandline.h | 217 QString metavar; member
226 QString metavar; member
238 QString metavar; member
|
| /dports/devel/py-typer/typer-0.4.0/docs_src/arguments/help/ |
| H A D | tutorial006.py | 4 def main(name: str = typer.Argument("World", metavar="✨username✨")): argument
|
| /dports/devel/py-plac/plac-1.3.4/doc/ |
| H A D | annotations.py | 3 def __init__(self, help='', type=None, choices=None, metavar=None): argument
|
| /dports/net/google-cloud-sdk/google-cloud-sdk/lib/googlecloudsdk/command_lib/organizations/ |
| H A D | org_utils.py | 29 def __init__(self, org_argument, metavar='ORGANIZATION_ID'): argument
|
| /dports/net/google-cloud-sdk/google-cloud-sdk/platform/bq/third_party/absl/flags/ |
| H A D | argparse_flags.py | 241 …def __init__(self, option_strings, dest, help, metavar, flag_instance): # pylint: disable=redefin… argument
268 …def __init__(self, option_strings, dest, help, metavar, flag_instance): # pylint: disable=redefin… argument
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| /dports/devel/py-absl/absl-py-0.7.1/absl/flags/ |
| H A D | argparse_flags.py | 241 …def __init__(self, option_strings, dest, help, metavar, flag_instance): # pylint: disable=redefin… argument
268 …def __init__(self, option_strings, dest, help, metavar, flag_instance): # pylint: disable=redefin… argument
|
| /dports/devel/py-plac/plac-1.3.4/ |
| H A D | plac_core.py | 88 def pos(arg, help=None, type=None, choices=None, metavar=None): argument
96 def opt(arg, help=None, type=None, abbrev=None, choices=None, metavar=None): argument
125 choices=None, metavar=None): argument
|
| /dports/devel/py-absl-py/absl-py-0.15.0/absl/flags/ |
| H A D | argparse_flags.py | 246 metavar, argument
282 metavar, argument
|
| /dports/devel/R-cran-optparse/optparse/R/ |
| H A D | optparse.R | 93 metavar = "character", repr in OptionParserOption
234 help = "", metavar = NULL, callback = NULL, callback_args = NULL) { argument
302 dest = NULL, default = NULL, help = "", metavar = NULL, argument
|
| /dports/www/py-tornado4/tornado-4.5.3/tornado/ |
| H A D | options.py | 189 def define(self, name, default=None, type=None, help=None, metavar=None, argument
421 metavar=None, multiple=False, file_name=None, group_name=None, argument
550 def define(name, default=None, type=None, help=None, metavar=None, argument
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| /dports/www/py-tornado5/tornado-5.1.1/tornado/ |
| H A D | options.py | 200 def define(self, name, default=None, type=None, help=None, metavar=None, argument
481 metavar=None, multiple=False, file_name=None, group_name=None, argument
610 def define(name, default=None, type=None, help=None, metavar=None, argument
|
| /dports/sysutils/py-salt/salt-3004.1/salt/ext/tornado/ |
| H A D | options.py | 190 def define(self, name, default=None, type=None, help=None, metavar=None, argument
422 metavar=None, multiple=False, file_name=None, group_name=None, argument
551 def define(name, default=None, type=None, help=None, metavar=None, argument
|
| /dports/devel/py-keystoneauth1/keystoneauth1-4.4.0/keystoneauth1/loading/ |
| H A D | opts.py | 71 metavar=None, argument
|
| /dports/sysutils/vector/vector-0.10.0/cargo-crates/wabt-sys-0.7.1/wabt/src/ |
| H A D | option-parser.cc | 33 const std::string& metavar, in Option()
84 const char* metavar, in AddOption()
|
| /dports/www/firefox/firefox-99.0/third_party/wasm2c/src/ |
| H A D | option-parser.cc | 33 const std::string& metavar, in Option()
94 const char* metavar, in AddOption()
|
| /dports/www/firefox-esr/firefox-91.8.0/js/src/shell/ |
| H A D | jsoptparse.cpp | 535 const char* metavar, const char* help, in addIntOption()
563 const char* metavar, const char* help) { in addStringOption()
576 const char* metavar, const char* help) { in addMultiStringOption()
|