Searched defs:nSitesOfPat (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/mrbayes/MrBayes-3.2.7/src/ |
| H A D | likelihood.c | 5920 CLFlt *lnScaler, *nSitesOfPat, *lnL_SSE, *lnLI_SSE; in Likelihood_Gen_SSE() local
6103 CLFlt *clP, *lnScaler, *nSitesOfPat, *clInvar=NULL; in Likelihood_Gen_GibbsGamma() local
6366 CLFlt *clP, *lnScaler, *nSitesOfPat, *clInvar; in Likelihood_NUC4_GibbsGamma() local
6605 CLFlt *lnScaler, *nSitesOfPat, *lnL_Vec, *lnLI_Vec; in Likelihood_NUC4_FMA() local
6769 CLFlt *lnScaler, *nSitesOfPat, *lnL_Vec, *lnLI_Vec; in Likelihood_NUC4_AVX() local
7112 CLFlt **clP,*clPtr, *lnScaler, *nSitesOfPat; in Likelihood_NY98() local
7185 CLFlt *lnScaler, *nSitesOfPat, *lnL_Vec; in Likelihood_NY98_SSE() local
7271 CLFlt *clPtr, **clP, *lnScaler, *nSitesOfPat; in Likelihood_Res() local
7365 CLFlt *lnScaler, *nSitesOfPat, *lnL_Vec; in Likelihood_Res_SSE() local
7473 CLFlt *clPtr, **clP, *lnScaler, *nSitesOfPat; in Likelihood_Std() local
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| H A D | mbbeagle.c | 1125 CLFlt *clInvar=NULL, *nSitesOfPat; in TreeLikelihood_Beagle() local
2621 CLFlt *clInvar=NULL, *nSitesOfPat; in TreeLikelihood_BeagleMultiPartition() local
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| H A D | proposal.c | 9481 CLFlt *nSitesOfPat, *nSites, *globalNSitesOfPat; in Move_ParsFossilSPRClock() local
10091 CLFlt *nSitesOfPat, *nSites, *globalNSitesOfPat; in Move_ParsSPR() local
10552 CLFlt *nSites, *nSitesOfPat=NULL, *globalNSitesOfPat; in Move_ParsSPR1() local
11201 CLFlt *nSites, *nSitesOfPat=NULL, *globalNSitesOfPat; in Move_ParsSPR2() local
11881 CLFlt *nSitesOfPat, *nSites, *globalNSitesOfPat; in Move_ParsSPRClock() local
12445 CLFlt *nSites, *nSitesOfPat=NULL, *globalNSitesOfPat; in Move_ParsTBR1() local
12957 CLFlt *nSites, *nSitesOfPat=NULL, *globalNSitesOfPat; in Move_ParsTBR2() local
13474 CLFlt *nSitesOfPat; in Move_Pinvar() local
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| H A D | mcmc.c | 4340 CLFlt *nSitesOfPat, fpLength, length; in FindBestNode() local
4863 CLFlt *nSitesOfPat; in GetFitchPartials() local
5025 CLFlt *nSitesOfPat; in GetParsimonyBrlens() local
5084 CLFlt *nSitesOfPat; in GetParsimonyLength() local
5779 double *nSitesOfPat; in InitChainCondLikes() local
7651 CLFlt *nSitesOfPat; in LogPrior() local
9631 …CLFlt *nSitesOfPat, *clP, *clA, *tiP, *tiP1, *tiP2, like, like1, like2, CLsum, CLsum1, CLsum… in NewtonRaphsonBrlen() local
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