/dports/cad/alliance/alliance/src/genpat/src/ |
H A D | AFFECT.c | 64 int dim = 0,num_ident,sens,i,j; local
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H A D | libpat_l.c | 909 struct paevt *CreatePaevt(tete_paevt,num_ident,valeur) in CreatePaevt() argument
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/align_format/ |
H A D | vectorscreen.cpp | 134 int score1, score2, sum_n, num_ident; in AlnFromRangeAscendingSort() local 160 int score1, score2, sum_n, num_ident; in AlnScoreDescendingSort() local 178 int score, sum_n, num_ident; in x_GetEdgeRanges() local 218 int score, sum_n, num_ident; in x_GetMatchType() local
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H A D | tabular.cpp | 750 int num_ident = -1; in SetFields() local 1314 CBlastTabularInfo::SetCounts(int num_ident, int length, int gaps, int gap_opens, in SetCounts() 1680 int num_ident = 0; in s_SetAirrAlignmentInfo() local 1710 int num_ident = 0; in s_SetAirrAlignmentInfo() local 1740 int num_ident = 0; in s_SetAirrAlignmentInfo() local
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H A D | align_format_util.cpp | 110 int& num_ident, in s_GetBlastScore() 662 int& num_ident, in GetAlnScores() 676 int& num_ident, in GetAlnScores() 1402 int num_ident = 0; in GetPercentIdentity() local 1476 int score1, score2, sum_n, num_ident; in SortHitByTotalScoreDescending() local 2982 int score, sum_n, num_ident; in FilterSeqalignByEval() local 3034 int score, sum_n, num_ident; in FilterSeqalignByPercentIdent() local 3060 int score, sum_n, num_ident; in FilterSeqalignByScoreParams() local 4069 int num_ident = 0; in GetSeqAlignCalcParams() local 4101 int num_ident = 0; in GetSeqAlignSetCalcParams() local [all …]
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/align_format/ |
H A D | vectorscreen.cpp | 134 int score1, score2, sum_n, num_ident; in AlnFromRangeAscendingSort() local 160 int score1, score2, sum_n, num_ident; in AlnScoreDescendingSort() local 178 int score, sum_n, num_ident; in x_GetEdgeRanges() local 218 int score, sum_n, num_ident; in x_GetMatchType() local
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H A D | tabular.cpp | 750 int num_ident = -1; in SetFields() local 1314 CBlastTabularInfo::SetCounts(int num_ident, int length, int gaps, int gap_opens, in SetCounts() 1680 int num_ident = 0; in s_SetAirrAlignmentInfo() local 1710 int num_ident = 0; in s_SetAirrAlignmentInfo() local 1740 int num_ident = 0; in s_SetAirrAlignmentInfo() local
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H A D | align_format_util.cpp | 110 int& num_ident, in s_GetBlastScore() 661 int& num_ident, in GetAlnScores() 675 int& num_ident, in GetAlnScores() 1401 int num_ident = 0; in GetPercentIdentity() local 1475 int score1, score2, sum_n, num_ident; in SortHitByTotalScoreDescending() local 2981 int score, sum_n, num_ident; in FilterSeqalignByEval() local 3033 int score, sum_n, num_ident; in FilterSeqalignByPercentIdent() local 3059 int score, sum_n, num_ident; in FilterSeqalignByScoreParams() local 4068 int num_ident = 0; in GetSeqAlignCalcParams() local 4100 int num_ident = 0; in GetSeqAlignSetCalcParams() local [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/api/ |
H A D | neutral_seqalign.hpp | 89 int num_ident; ///< Number of identical residues member
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H A D | bl2seq_unit_test.cpp | 130 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 598 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 679 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 706 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 734 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 774 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 800 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 3405 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 3469 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local
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H A D | blastengine_unit_test.cpp | 401 int num_ident; in BOOST_AUTO_TEST_CASE() local
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/api/ |
H A D | neutral_seqalign.hpp | 89 int num_ident; ///< Number of identical residues member
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H A D | bl2seq_unit_test.cpp | 130 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 598 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 679 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 706 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 734 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 774 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 800 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 3405 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local 3469 int num_ident = 0; in BOOST_AUTO_TEST_CASE() local
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H A D | blastengine_unit_test.cpp | 401 int num_ident; in BOOST_AUTO_TEST_CASE() local
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/blast_format/ |
H A D | blastfmtutil_unit_test.cpp | 177 int num_ident; in BOOST_AUTO_TEST_CASE() local
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/blast_format/ |
H A D | blastfmtutil_unit_test.cpp | 177 int num_ident; in BOOST_AUTO_TEST_CASE() local
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/dports/converters/p5-Unicode-Map8/Unicode-Map8-0.13/ |
H A D | map8x.c | 407 int num_ident = 0; in map8_fprint() local
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/core/ |
H A D | blast_hits.h | 128 Int4 num_ident; /**< Number of identical base pairs in this HSP */ member
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/core/ |
H A D | blast_hits.h | 128 Int4 num_ident; /**< Number of identical base pairs in this HSP */ member
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/dports/biology/ncbi-toolkit/ncbi/algo/blast/core/ |
H A D | blast_hits.h | 128 Int4 num_ident; /**< Number of identical base pairs in this HSP */ member
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/format/ |
H A D | blastxml_format.cpp | 123 int score, num_ident; in s_SeqAlignSetToXMLHsps() local
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H A D | blastxml2_format.cpp | 111 int score, num_ident; in s_SeqAlignSetToXMLHsps() local
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/format/ |
H A D | blastxml_format.cpp | 123 int score, num_ident; in s_SeqAlignSetToXMLHsps() local
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H A D | blastxml2_format.cpp | 111 int score, num_ident; in s_SeqAlignSetToXMLHsps() local
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/dports/biology/ncbi-toolkit/ncbi/tools/ |
H A D | blastool.c | 4578 Int4 num_mismatches, num_gap_opens, align_length, num_ident; in BlastPrintAlignInfo() local 5032 Int4 num_mismatches, num_gap_opens, align_length, num_ident; in MegaBlastPrintAlignInfo() local 6005 Int4 i, num_ident, align_length, q_off, s_off; in BlastHSPGetNumIdentical() local 6080 Int4 i, num_ident, align_length, q_off, s_off; in OOFBlastHSPGetNumIdentical() local
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