| /dports/science/py-MDAnalysisTests/MDAnalysisTests-0.19.2/MDAnalysisTests/coordinates/ |
| H A D | test_memory.py | 208 def ref_pos(request): member in TestMemoryReaderVelsForces
237 def test_velocities(self, ref_pos, ref_vels): argument
245 def test_forces(self, ref_pos, ref_forces): argument
253 def test_both(self, ref_pos, ref_vels, ref_forces): argument
263 def test_wrongshape(self, ref_pos, param): argument
271 def ref_pos(): member in TestDimensions
279 def test_single_box(self, ref_pos): argument
287 def test_varying_box(self, ref_pos, ref_box): argument
293 def test_wrong_length(self, ref_pos): argument
299 def test_wrong_shape(self, ref_pos): argument
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| /dports/biology/sra-tools/sra-tools-2.11.0/tools/sra-pileup/ |
| H A D | matecache.c | 169 … uint32_t db_idx, int64_t key, INSDC_coord_zero ref_pos, uint32_t flags, INSDC_coord_len tlen ) in matecache_insert_same_ref()
200 INSDC_coord_zero *ref_pos, uint32_t *flags, INSDC_coord_len *tlen ) in matecache_lookup_same_ref()
345 uint32_t db_idx, int64_t key, INSDC_coord_zero ref_pos, uint32_t ref_idx, int64_t seq_id ) in matecache_insert_unaligned()
374 … INSDC_coord_zero * const ref_pos, uint32_t * const ref_idx, int64_t * const seq_id ) in matecache_lookup_unaligned()
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| H A D | pileup_counters.c | 249 INSDC_coord_zero ref_pos; in walk_counter_state() local
268 INSDC_coord_zero ref_pos, in print_counter_line()
374 INSDC_coord_zero ref_pos, in print_mismatches_line()
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| H A D | walk_debug.c | 102 INSDC_coord_zero ref_pos; in walk_debug_placement() local
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| H A D | ref_walker_0.h | 65 INSDC_coord_zero ref_pos; /* current position on the reference */ member
|
| /dports/science/liggghts/LIGGGHTS-PUBLIC-3.8.0-26-g6e873439/lib/colvars/ |
| H A D | colvarproxy.h | 133 cvm::atom_pos const &ref_pos) in select_closest_images()
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| H A D | colvaratoms.h | 168 std::vector<cvm::atom_pos> ref_pos; variable
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| H A D | colvarmodule.h | 463 atom_pos const &ref_pos) in select_closest_image()
469 atom_pos const &ref_pos) in select_closest_images()
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| H A D | colvarcomp.h | 601 std::vector<cvm::atom_pos> ref_pos; variable
1000 std::vector<cvm::atom_pos> ref_pos; variable
1130 std::vector<cvm::atom_pos> ref_pos; variable
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| /dports/science/votca/votca-2021.2-18560-gfbe18d971/xtp/src/tests/ |
| H A D | test_qmmolecule.cc | 54 if (!check_min) { in BOOST_AUTO_TEST_CASE()
55 std::cout << "ref" << std::endl; in BOOST_AUTO_TEST_CASE()
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| /dports/science/qmcpack/qmcpack-3.11.0/src/Particle/ |
| H A D | VirtualParticleSet.cpp | 43 const PosType& ref_pos, in makeMoves()
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| /dports/games/flare-engine/flare-engine-1.12/src/ |
| H A D | GameSlotPreview.cpp | 74 unsigned ref_pos; in loadLayerDefinitions() local
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| /dports/sysutils/apachetop/apachetop-0.18.4/src/ |
| H A D | log.h | 34 int ref_pos; /* location of referrer in map */ member
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/sra/readers/bam/test/ |
| H A D | bamindex_test.cpp | 395 TSeqPos ref_pos = it.GetRefSeqPos(); in Run() local
423 TSeqPos ref_pos = it.GetRefSeqPos(); in Run() local
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| /dports/science/lammps/lammps-stable_29Sep2021/lib/colvars/ |
| H A D | colvarcomp.h | 719 std::vector<cvm::atom_pos> ref_pos; variable
1217 std::vector<cvm::atom_pos> ref_pos; variable
1433 std::vector<cvm::atom_pos> ref_pos; variable
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| H A D | colvaratoms.h | 336 std::vector<cvm::atom_pos> ref_pos; variable
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| /dports/science/chrono/chrono-7.0.1/src/chrono_vehicle/output/ |
| H A D | ChVehicleOutputASCII.cpp | 60 auto& ref_pos = body->GetFrame_REF_to_abs().GetPos(); in WriteAuxRefBodies() local
|
| /dports/science/votca/votca-2021.2-18560-gfbe18d971/xtp/xtp-2a31d70/src/tests/ |
| H A D | test_polarsegment.cc | 53 Eigen::Vector3d ref_pos = in BOOST_AUTO_TEST_CASE() local
|
| /dports/multimedia/gstreamer1-plugins-svt-av1/SVT-AV1-3971c982311d49f9355dc8dccdcf8d21b70fa624/Source/Lib/Common/Codec/ |
| H A D | EbCommonUtils.h | 93 int32_t ref_pos = ((mi_row & 0x01) || !(bh & 0x01) || !subsampling_y) && in is_chroma_reference() local
|
| /dports/multimedia/svt-av1/SVT-AV1-3971c982311d49f9355dc8dccdcf8d21b70fa624/Source/Lib/Common/Codec/ |
| H A D | EbCommonUtils.h | 93 int32_t ref_pos = ((mi_row & 0x01) || !(bh & 0x01) || !subsampling_y) && in is_chroma_reference() local
|
| /dports/www/firefox/firefox-99.0/third_party/jpeg-xl/lib/jxl/ |
| H A D | dec_patch_dictionary.h | 95 PatchReferencePosition ref_pos; member
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| /dports/mail/thunderbird/thunderbird-91.8.0/third_party/jpeg-xl/lib/jxl/ |
| H A D | dec_patch_dictionary.cc | 61 PatchReferencePosition ref_pos; in Decode() local
|
| /dports/www/firefox-esr/firefox-91.8.0/third_party/jpeg-xl/lib/jxl/ |
| H A D | dec_patch_dictionary.cc | 61 PatchReferencePosition ref_pos; in Decode() local
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| /dports/graphics/libjxl/libjxl-0.6.1/lib/jxl/ |
| H A D | dec_patch_dictionary.cc | 64 PatchReferencePosition ref_pos; in Decode() local
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| /dports/sysutils/dar/dar-2.5.14-bis/src/libdar/ |
| H A D | tronc.cpp | 332 infinint ref_pos = ref->get_position(); in set_back_current_position() local
|