| /dports/biology/vt/vt-0.57721/lib/htslib/htslib/ |
| H A D | cram.h | 81 typedef struct refs_t refs_t; typedef
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| /dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/htslib/ |
| H A D | cram.h | 81 typedef struct refs_t refs_t; typedef
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| /dports/biology/stacks/stacks-2.4/htslib/htslib/ |
| H A D | cram.h | 81 typedef struct refs_t refs_t; typedef
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| /dports/biology/kallisto/kallisto-0.46.1/ext/htslib/htslib/ |
| H A D | cram.h | 81 typedef struct refs_t refs_t; typedef
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| /dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/ |
| H A D | cram.h | 100 typedef struct refs_t refs_t; typedef
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| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/ |
| H A D | cram.h | 81 typedef struct refs_t refs_t; typedef
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| /dports/biology/htslib/htslib-1.14/htslib/ |
| H A D | cram.h | 100 typedef struct refs_t refs_t; typedef
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| /dports/math/z3/z3-z3-4.8.13/src/math/automata/ |
| H A D | symbolic_automata.h | 35 typedef ref_vector<T, M> refs_t; typedef
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| /dports/math/py-z3-solver/z3-z3-4.8.10/src/math/automata/ |
| H A D | symbolic_automata.h | 35 typedef ref_vector<T, M> refs_t; typedef
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| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/ |
| H A D | cram_structs.h | 624 struct refs_t { struct
625 string_alloc_t *pool; // String pool for holding filenames and SN vals
628 ref_entry **ref_id; // ref_entry*, index by ID
629 int nref; // number of ref_entry
631 char *fn; // current file opened
632 BGZF *fp; // and the hFILE* to go with it.
634 int count; // how many cram_fd sharing this refs struct
636 pthread_mutex_t lock; // Mutex for multi-threaded updating
637 ref_entry *last; // Last queried sequence
638 int last_id; // Used in cram_ref_decr_locked to delay free
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| /dports/biology/py-pysam/pysam-0.18.0/htslib/cram/ |
| H A D | cram_structs.h | 682 struct refs_t { struct
683 string_alloc_t *pool; // String pool for holding filenames and SN vals
686 ref_entry **ref_id; // ref_entry*, index by ID
687 int nref; // number of ref_entry
689 char *fn; // current file opened
690 BGZF *fp; // and the hFILE* to go with it.
692 int count; // how many cram_fd sharing this refs struct
694 pthread_mutex_t lock; // Mutex for multi-threaded updating
695 ref_entry *last; // Last queried sequence
696 int last_id; // Used in cram_ref_decr_locked to delay free
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| /dports/biology/htslib/htslib-1.14/cram/ |
| H A D | cram_structs.h | 682 struct refs_t { struct
683 string_alloc_t *pool; // String pool for holding filenames and SN vals
686 ref_entry **ref_id; // ref_entry*, index by ID
687 int nref; // number of ref_entry
689 char *fn; // current file opened
690 BGZF *fp; // and the hFILE* to go with it.
692 int count; // how many cram_fd sharing this refs struct
694 pthread_mutex_t lock; // Mutex for multi-threaded updating
695 ref_entry *last; // Last queried sequence
696 int last_id; // Used in cram_ref_decr_locked to delay free
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| /dports/biology/vt/vt-0.57721/lib/htslib/cram/ |
| H A D | cram_structs.h | 633 } refs_t; typedef
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| /dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/ |
| H A D | cram_structs.h | 633 } refs_t; typedef
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| /dports/biology/stacks/stacks-2.4/htslib/cram/ |
| H A D | cram_structs.h | 629 } refs_t; typedef
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| /dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/ |
| H A D | cram_structs.h | 629 } refs_t; typedef
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| /dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/ |
| H A D | cram_structs.h | 642 } refs_t; typedef
|