| /dports/biology/mmseqs2/MMseqs2-13-45111/src/test/ |
| H A D | TestCounting.cpp | 24 size_t revComp = 0; in main() local
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| H A D | TestKmerNucl.cpp | 57 size_t revComp = Util::revComplement(kmerIdx, kmer_size); in main() local
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| /dports/biology/bbmap/bbmap/pytools/lib/ |
| H A D | kmercount_pos.py | 39 def revComp(seq): function
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| /dports/biology/py-bx-python/bx-python-0.8.13/scripts/ |
| H A D | gene_fourfold_sites.py | 129 def revComp(seq): function
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/alf/ |
| H A D | alf.cpp | 134 String<char> revComp; in main() local
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| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/readorientation/ |
| H A D | AltSiteRecordUnitTest.java | 72 …final AltSiteRecord revComp = new AltSiteRecord(revCompContext, refCount, altCount, refF1R2, altF1… in testGetReverseComplement() local
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| H A D | ArtifactPriorUnitTest.java | 136 final String revComp = "CAT"; in testGet() local
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| /dports/biology/checkm/CheckM-1.0.18/scripts/ |
| H A D | genomeCharacteristics.py | 47 def revComp(self, dna): member in GenomeCharacteristics
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| /dports/biology/py-crossmap/CrossMap-0.5.4/lib/cmmodule/ |
| H A D | fasta.py | 115 def revComp(self,seqID=None): member in Fasta
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/splazers/ |
| H A D | readSimulator.h | 222 bool revComp = (sortedStartPos[samplePosCounter] & REVCOMP) != 0; variable
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers/ |
| H A D | readSimulator.h | 221 bool revComp = (sortedStartPos[samplePosCounter] & REVCOMP) != 0; variable
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| /dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/razers3/ |
| H A D | readSimulator.h | 218 bool revComp = sortedStartPos[samplePosCounter] & REVCOMP; variable
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| /dports/biology/seqan1/seqan-1.3.1/apps/razers/ |
| H A D | readSimulator.h | 221 bool revComp = (sortedStartPos[samplePosCounter] & REVCOMP) != 0; variable
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| /dports/biology/seqan1/seqan-1.3.1/apps/razers2/ |
| H A D | readSimulator.h | 221 bool revComp = sortedStartPos[samplePosCounter] & REVCOMP; variable
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| /dports/biology/seqan1/seqan-1.3.1/apps/splazers/ |
| H A D | readSimulator.h | 221 bool revComp = (sortedStartPos[samplePosCounter] & REVCOMP) != 0; variable
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| /dports/biology/ncbi-entrez-direct/ncbi-entrez-direct-14.9.20210423/eutils/ |
| H A D | misc.go | 638 var revComp = map[rune]rune{ var
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| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/read/ |
| H A D | ReadUtilsUnitTest.java | 185 String revComp = ReadUtils.getBasesReverseComplement(read); in testGetBasesReverseComplement() local
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| /dports/biology/groopm/GroopM-0.3.4/groopm/ |
| H A D | mstore.py | 1688 def revComp(self, seq): member in KmerSigEngine
|