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Searched defs:smith_waterman (Results 1 – 7 of 7) sorted by relevance

/dports/biology/diamond/diamond-2.0.13/src/chaining/
H A Dsmith_waterman.cpp35 void smith_waterman(Sequence q, Sequence s, const Diag_graph &diags) in smith_waterman() function
/dports/textproc/py-textdistance/textdistance-4.2.2/textdistance/algorithms/
H A Dedit_based.py729 smith_waterman = SmithWaterman() variable
/dports/biology/ncbi-toolkit/ncbi/network/blast3/client/
H A Dobjblst3.h148 Uint1 smith_waterman; member
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/core/
H A Dblast_engine.c989 Boolean smith_waterman = in s_BlastSetUpAuxStructures() local
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/core/
H A Dblast_engine.c989 Boolean smith_waterman = in s_BlastSetUpAuxStructures() local
/dports/biology/ncbi-toolkit/ncbi/tools/
H A Dblastdef.h1158 smith_waterman; member
1252 Boolean smith_waterman; member
1297 Boolean smith_waterman; member
/dports/biology/ncbi-toolkit/ncbi/algo/blast/core/
H A Dblast_engine.c1115 Boolean smith_waterman = in s_BlastSetUpAuxStructures() local