/dports/devel/libuninum/libuninum-2.7/ |
H A D | uninum.c | 6080 mpz_t Residue; in AdditiveIntToString() local 6153 Residue = k; in CyrillicAlphabeticIntToString() 6202 mpz_t Residue; in GreekAlphabeticIntToString() local 6296 Residue = k; in RomanToStringAux() 6316 Residue -= 400; in RomanToStringAux() 6339 Residue -= 40; in RomanToStringAux() 6361 Residue -= 4; in RomanToStringAux() 7118 mpz_t Residue; in HebrewIntToString() local 7148 mpz_sub_ui(Residue,Residue,15); in HebrewIntToString() 7153 mpz_sub_ui(Residue,Residue,16); in HebrewIntToString() [all …]
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/dports/science/py-avogadrolibs/avogadrolibs-1.94.0/docs/api/class/ |
H A D | class_avogadro_1_1_core_1_1_residue.rst | 1 Class Avogadro::Core::Residue 4 .. doxygenclass:: Avogadro::Core::Residue
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/dports/science/avogadrolibs/avogadrolibs-1.94.0/docs/api/class/ |
H A D | class_avogadro_1_1_core_1_1_residue.rst | 1 Class Avogadro::Core::Residue 4 .. doxygenclass:: Avogadro::Core::Residue
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/dports/science/avogadrolibs/avogadrolibs-1.94.0/tests/io/ |
H A D | mmtftest.cpp | 36 using Avogadro::Core::Residue; 122 Residue& res = molecule.residue(0); in TEST() 128 Residue& res2 = molecule.residue(579); in TEST() 134 Residue& res3 = molecule.residue(580); in TEST()
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/dports/science/py-avogadrolibs/avogadrolibs-1.94.0/tests/io/ |
H A D | mmtftest.cpp | 36 using Avogadro::Core::Residue; 122 Residue& res = molecule.residue(0); in TEST() 128 Residue& res2 = molecule.residue(579); in TEST() 134 Residue& res3 = molecule.residue(580); in TEST()
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/dports/biology/hhsuite/hh-suite-3.3.0/scripts/hhpred/lib/ |
H A D | modeller.pm | 1624 my $Residue = $_[0]; 1649 if (grep(/\s$Residue:$Atom\s/,@ATMGRP01)){@alternatives=@ATMGRP01;} 1650 elsif (grep(/\s$Residue:$Atom\s/,@ATMGRP02)){@alternatives=@ATMGRP02;} 1651 elsif (grep(/\s$Residue:$Atom\s/,@ATMGRP03)){@alternatives=@ATMGRP03;} 1652 elsif (grep(/\s$Residue:$Atom\s/,@ATMGRP04)){@alternatives=@ATMGRP04;} 1653 elsif (grep(/\s$Residue:$Atom\s/,@ATMGRP05)){@alternatives=@ATMGRP05;} 1654 elsif (grep(/\s$Residue:$Atom\s/,@ATMGRP06)){@alternatives=@ATMGRP06;} 1655 elsif (grep(/\s$Residue:$Atom\s/,@ATMGRP07)){@alternatives=@ATMGRP07;} 1656 elsif (grep(/\s$Residue:$Atom\s/,@ATMGRP08)){@alternatives=@ATMGRP08;} 1657 elsif (grep(/\s$Residue:$Atom\s/,@ATMGRP09)){@alternatives=@ATMGRP09;} [all …]
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/dports/biology/jalview/jalview/src/jalview/xml/binding/sifts/ |
H A D | Entry.java | 1819 protected List<Entry.Entity.Segment.ListResidue.Residue> residue; 1843 public List<Entry.Entity.Segment.ListResidue.Residue> getResidue() { in getResidue() 1845 residue = new ArrayList<Entry.Entity.Segment.ListResidue.Residue>(); in getResidue() 1896 public static class Residue { class in Entry.Entity.Segment.ListResidue 1898 protected List<Entry.Entity.Segment.ListResidue.Residue.CrossRefDb> crossRefDb; 1899 … protected List<Entry.Entity.Segment.ListResidue.Residue.ResidueDetail> residueDetail; 1933 … public List<Entry.Entity.Segment.ListResidue.Residue.CrossRefDb> getCrossRefDb() { in getCrossRefDb() 1935 … crossRefDb = new ArrayList<Entry.Entity.Segment.ListResidue.Residue.CrossRefDb>(); in getCrossRefDb() 1962 … public List<Entry.Entity.Segment.ListResidue.Residue.ResidueDetail> getResidueDetail() { in getResidueDetail() 1964 … residueDetail = new ArrayList<Entry.Entity.Segment.ListResidue.Residue.ResidueDetail>(); in getResidueDetail()
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/dports/science/mmdb2/mmdb2-2.0.20/mmdb2/ |
H A D | mmdb_atom.h | 144 friend class Residue; variable 465 DefineFactoryFunctions(Residue); 467 class Residue : public UDData { 488 Residue (); 489 Residue ( PChain Chain_Owner ); 490 Residue ( PChain Chain_Owner, const ResName resName, 492 Residue ( io::RPStream Object ); 493 ~Residue();
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/dports/math/vtk9/VTK-9.1.0/IO/Chemistry/ |
H A D | vtkMoleculeReaderBase.cxx | 47 this->Residue = nullptr; in vtkMoleculeReaderBase() 137 if (!this->Residue) in ReadMolecule() 139 this->Residue = vtkSmartPointer<vtkIdTypeArray>::New(); in ReadMolecule() 143 this->Residue->Reset(); in ReadMolecule() 145 this->Residue->SetName("residue"); in ReadMolecule() 146 output->GetPointData()->AddArray(this->Residue); in ReadMolecule()
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/dports/math/cado-nfs/cado-nfs-f4284e2391121b2bfb97bc4880b6273c7250dc2f/tests/sieve/ecm/ |
H A D | test_Weierstrass.cpp | 25 typedef typename MODULUS::Residue Residue; typedef in TestWeierstrass 45 setResidue ( Residue &r, const Modulus &m, const cxx_mpz &v ) const in setResidue() 58 Residue x ( m ), y ( m ); in setPoint() 72 Residue x ( m ), y ( m ), z ( m ); in setPoint() 189 Residue a ( *m ); in parseLine()
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/dports/math/givaro/givaro-4.1.1/src/library/poly1/ |
H A D | givpoly1proot.inl | 35 template<class Residue> 36 …actorDom<Domain,Tag, RandomIterator>::find_irred_binomial (Element& R, Degree n, Residue MOD) const 38 for(Residue a=0; a<MOD; ++a) { 54 template<class Residue> 75 template<class Residue> 99 template<class Residue> 135 template<class Residue> 170 template<class Residue> 207 template<class Residue> 257 template<class Residue> [all …]
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/dports/science/gchemutils/gnome-chemistry-utils-0.14.16/libs/gcu/ |
H A D | document.h | 43 class Residue; variable 150 virtual Residue *CreateResidue (char const *name, char const *symbol, Molecule *molecule); 160 virtual Residue const *GetResidue (char const *symbol, bool *ambiguous = NULL);
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H A D | formula.h | 228 class Residue; variable 244 FormulaResidue (Residue const *res, char const *symbol, int Z); 271 Residue const *residue;
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/dports/math/latte-integrale/latte-version_1_7_6/ |
H A D | TODO | 13 * Residue calculations: 14 - "Re-implement" Residue in terms of Residue_Single_Cone (Residue.cpp).
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/dports/science/gabedit/GabeditSrc251_300720/src/Geometry/ |
H A D | BuildPolyPeptide.c | 134 g_free(G[i].Residue); in init_variables() 158 g_free(G[i].Residue); in destroy_dlg() 250 geometry0[n].Residue = g_strdup(G[i].Residue); in define_geometry_to_draw() 267 geometry[n].Residue = g_strdup(geometry0[n].Residue); in define_geometry_to_draw() 393 G[j].Residue=g_strdup(Frag.Atoms[i].Residue); in add_fragment() 473 G[Nb].Residue = g_strdup("H"); in add_fragment() 541 if(G[i].Residue) g_free(G[i].Residue); in delete_last_fragment() 567 if(!strcmp(G[i].Residue , "NHE")) { CA = N;} in delete_last_fragment() 610 …if(Nb>0 && (strlen(G[Nb-1].Residue)<4 || (strlen(G[Nb-1].Residue)==4 && (G[Nb-1].Residue[0]=='N'||… in undo() 617 sprintf(fragName,"%s",G[Nb-1].Residue+1); in undo() [all …]
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/dports/science/gchemutils/gnome-chemistry-utils-0.14.16/plugins/paint/residues/ |
H A D | plugin.h | 33 class Residue; variable 45 void OnNewResidue (gcp::Residue *res);
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/dports/math/gap/gap-4.11.0/pkg/FactInt-1.6.3/lib/ |
H A D | pplus1.gi | 64 local Residue,ResNo,a, 99 Residue := 1; 101 Info(IntegerFactorizationInfo,2,"Residue no. ",ResNo); 102 a := [[Residue,1],[1,0]]; 132 Residue := NextPrimeInt(Residue);
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/dports/biology/jalview/jalview/src/MCview/ |
H A D | Residue.java | 25 public class Residue class 33 public Residue(Vector<Atom> resAtoms, int number, int count) in Residue() method in Residue
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/dports/math/cado-nfs/cado-nfs-f4284e2391121b2bfb97bc4880b6273c7250dc2f/utils/ |
H A D | modredc64.cpp | 10 Modulus::inv (Residue &r, const Residue &A) const in inv() 128 Modulus::intinv (Residue &r, const Residue &A) const in intinv() 256 Residue R(*this); in batchinv_u64()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/cn3d/ |
H A D | style_manager.cpp | 580 bool StyleManager::GetAtomStyle(const Residue *residue, in GetAtomStyle() 599 const Residue::AtomInfo *info = residue->GetAtomInfo(atom.aID); in GetAtomStyle() 606 if (info->classification == Residue::eAlphaBackboneAtom || in GetAtomStyle() 607 info->classification == Residue::ePartialBackboneAtom || in GetAtomStyle() 608 info->classification == Residue::eCompleteBackboneAtom) { in GetAtomStyle() 614 } else if (info->classification == Residue::eSideChainAtom) { in GetAtomStyle() 644 if (info->classification == Residue::eAlphaBackboneAtom || in GetAtomStyle() 645 info->classification == Residue::ePartialBackboneAtom || in GetAtomStyle() 931 const Residue::AtomInfo in GetBondStyle() 1071 if (info2->classification == Residue::eSideChainAtom && in GetBondStyle() [all …]
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/dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/ |
H A D | pepstats.output | 10 Average Residue Weight = 107.195 Charge = 1.5 16 Residue Number Mole% DayhoffStat 66 Average Residue Weight = 107.195 Charge = 1.5 72 Residue Number Mole% DayhoffStat
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/dports/biology/dsr-pdb/dsr-pdb-1.0.3/doc/ |
H A D | main_doc | 99 first is in Residue.h. 101 - add a new atom label to dsrpdb::Residue::Atom_label. 103 - add a new entry to dsrpdb::Residue::atom_name_data_. The entry consists of a 104 string which identifies the atom in pdb, the dsrpdb::Residue::Atom_label, and 107 - add the dsrpdb::Residue::Atom_label to the appropriate 109 dsrpdb::Residue::get_residue_initialization_data 112 dsrpdb::Residue::get_residue_initialization_data. The bond lists are
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/dports/science/gromacs/gromacs-2021.4/src/external/tng_io/include/tng/ |
H A D | tng_io.hpp | 21 class Residue; 44 friend class Residue; 1468 friend class Residue; 1507 class Residue class 1516 Residue(Trajectory * trajectory) in Residue() function in Tng::Residue 1524 ~Residue() in ~Residue() 1631 Residue *residue) in findResidue() 1645 Residue * residue) in addResidue() 1662 Residue * residue) in addResidueWithId()
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/dports/science/nwchem-data/nwchem-7.0.2-release/contrib/marat/python/ |
H A D | Residue.py | 9 class Residue: class 59 res0 = Residue()
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/dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/contrib/marat/python/ |
H A D | Residue.py | 9 class Residue: class 59 res0 = Residue()
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