Searched refs:ALP_set_of_parameters (Results 1 – 6 of 6) sorted by relevance
/dports/biology/diamond/diamond-2.0.13/src/lib/alp/ |
H A D | sls_pvalues.hpp | 51 struct ALP_set_of_parameters struct 53 ALP_set_of_parameters() in ALP_set_of_parameters() argument 162 const ALP_set_of_parameters &gumbel_params_); 165 ALP_set_of_parameters &gumbel_params_); 180 const ALP_set_of_parameters &par_, 195 static void compute_tmp_values(ALP_set_of_parameters &par_); 198 const ALP_set_of_parameters &par_, 213 const ALP_set_of_parameters &par_, 231 ALP_set_of_parameters &par_); 238 const ALP_set_of_parameters &ParametersSet, [all …]
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H A D | sls_pvalues.cpp | 50 const ALP_set_of_parameters &par_, in get_appr_tail_prob_with_cov() 298 ALP_set_of_parameters &par_) in compute_intercepts() 342 void pvalues::compute_tmp_values(ALP_set_of_parameters &par_) in compute_tmp_values() 367 const ALP_set_of_parameters &par_, in get_appr_tail_prob_with_cov_without_errors() 548 const ALP_set_of_parameters &par_, in get_P_error_using_splitting_method() 586 ALP_set_of_parameters par_tmp; in get_P_error_using_splitting_method() 780 const ALP_set_of_parameters &ParametersSet, in calculate_P_values() 823 const ALP_set_of_parameters &ParametersSet, in calculate_P_values() 940 const ALP_set_of_parameters &gumbel_params_) in operator <<() 1047 ALP_set_of_parameters &gumbel_params_) in operator >>() [all …]
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H A D | sls_alignment_evaluer.hpp | 171 const ALP_set_of_parameters ¶meters() const { return d_params; } in parameters() 203 ALP_set_of_parameters d_params;//set of Gumbel parameters
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/dports/biology/mmseqs2/MMseqs2-13-45111/lib/alp/ |
H A D | sls_pvalues.hpp | 51 struct ALP_set_of_parameters struct 53 ALP_set_of_parameters() in ALP_set_of_parameters() argument 162 const ALP_set_of_parameters &gumbel_params_); 165 ALP_set_of_parameters &gumbel_params_); 180 const ALP_set_of_parameters &par_, 195 static void compute_tmp_values(ALP_set_of_parameters &par_); 198 const ALP_set_of_parameters &par_, 213 const ALP_set_of_parameters &par_, 231 ALP_set_of_parameters &par_); 238 const ALP_set_of_parameters &ParametersSet, [all …]
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H A D | sls_pvalues.cpp | 50 const ALP_set_of_parameters &par_, in get_appr_tail_prob_with_cov() 298 ALP_set_of_parameters &par_) in compute_intercepts() 342 void pvalues::compute_tmp_values(ALP_set_of_parameters &par_) in compute_tmp_values() 367 const ALP_set_of_parameters &par_, in get_appr_tail_prob_with_cov_without_errors() 548 const ALP_set_of_parameters &par_, in get_P_error_using_splitting_method() 586 ALP_set_of_parameters par_tmp; in get_P_error_using_splitting_method() 780 const ALP_set_of_parameters &ParametersSet, in calculate_P_values() 823 const ALP_set_of_parameters &ParametersSet, in calculate_P_values() 940 const ALP_set_of_parameters &gumbel_params_) in operator <<() 1047 ALP_set_of_parameters &gumbel_params_) in operator >>() [all …]
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H A D | sls_alignment_evaluer.hpp | 176 const ALP_set_of_parameters ¶meters() const { return d_params; } in parameters() 208 ALP_set_of_parameters d_params;//set of Gumbel parameters
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