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Searched refs:AdvBoundedTo1Bit (Results 1 – 9 of 9) sorted by relevance

/dports/biology/plink/plink-ng-79b2df8c/2.0/include/
H A Dplink2_bits.h75 uint32_t AdvBoundedTo1Bit(const uintptr_t* bitarr, uint32_t loc, uint32_t ceil);
H A Dplink2_bits.cc268 uint32_t AdvBoundedTo1Bit(const uintptr_t* bitarr, uint32_t loc, uint32_t ceil) { in AdvBoundedTo1Bit() function
H A Dpgenlib_read.cc1533 variant_uidx_start = AdvBoundedTo1Bit(variant_include, variant_uidx_start, variant_uidx_end); in PgfiMultireadGetCachelineReq()
/dports/biology/plink/plink-ng-79b2df8c/2.0/
H A Dplink2_matrix_calc.cc398 const uint32_t first_king_uidx = AdvBoundedTo1Bit(king_include, 0, king_id_ct); in KingCutoffBatch()
399 uintptr_t king_uidx = AdvBoundedTo1Bit(king_include, first_king_uidx + 1, king_id_ct); in KingCutoffBatch()
415 king_uidx = AdvBoundedTo1Bit(king_include, king_uidx + 1, king_id_ct); in KingCutoffBatch()
461 king_uidx = AdvBoundedTo1Bit(king_include, king_uidx + 1, king_id_ct); in KingCutoffBatch()
3728 const uint32_t first_idx = AdvBoundedTo1Bit(missing_nz, 0, row_end_idx); in CalcDblMissingThread()
3732 sample_idx = AdvBoundedTo1Bit(missing_nz, row_start_idx, row_end_idx); in CalcDblMissingThread()
3770 sample_idx = AdvBoundedTo1Bit(missing_nz, sample_idx + 1, row_end_idx); in CalcDblMissingThread()
H A Dplink2_ld.cc1218 …const uint32_t initial_variant_uidx = AdvBoundedTo1Bit(variant_include, cip->chr_fo_vidx_start[chr… in LdPruneSubcontigSplitAll()
1281 …const uint32_t first_variant_uidx = AdvBoundedTo1Bit(variant_include, cip->chr_fo_vidx_start[chr_f… in LdPruneSubcontigSplitAll()
H A Dplink2_misc.cc871 prev_vidx_start = AdvBoundedTo1Bit(variant_include, prev_vidx_start, prev_chr_vidx_end); in RecoverVarIds()
930 …prev_chr_vidx_end) && (variant_bps[cur_vidx] == cur_bp); cur_vidx = AdvBoundedTo1Bit(variant_inclu… in RecoverVarIds()
8768 chr_idx = AdvBoundedTo1Bit(cip->haploid_mask, chr_idx, chr_idx_end); in Sdiff()
H A Dplink2_filter.cc4009 … variant_uidx = AdvBoundedTo1Bit(variant_include, cip->chr_fo_vidx_start[chr_fo_idx], chr_end); in EnforceImpR2Thresh()
H A Dplink2_glm.cc417 …prev_variant_uidx = AdvBoundedTo1Bit(orig_variant_include, first_variant_uidx_in_chr, raw_variant_… in GlmLocalOpen()
446 … prev_variant_uidx = AdvBoundedTo1Bit(orig_variant_include, prev_variant_uidx + 1, raw_variant_ct); in GlmLocalOpen()
474 … prev_variant_uidx = AdvBoundedTo1Bit(orig_variant_include, prev_variant_uidx + 1, raw_variant_ct); in GlmLocalOpen()
H A Dplink2.cc606 const uint32_t chr_idx = AdvBoundedTo1Bit(cip->chr_mask, 0, kChrRawEnd); in ApplyVariantBpFilters()