/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/ |
H A D | cram_io.h | 517 #define BLOCK_GROW(b,l) BLOCK_RESIZE((b), BLOCK_SIZE((b)) + (l)) macro 522 BLOCK_GROW((b),(l)); \ 530 BLOCK_GROW((b),1); \ 538 BLOCK_GROW((b),11); \
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H A D | cram_encode.c | 1949 BLOCK_GROW(s->aux_blk, aux_size*1.34+1); in cram_encode_aux_1_0() 2597 BLOCK_GROW(s->seqs_blk, cr->len+1); in process_one_read() 2598 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2858 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2862 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read()
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H A D | cram_decode.c | 2651 BLOCK_GROW(s->seqs_blk, cr->len); in cram_decode_slice() 2659 BLOCK_GROW(s->qual_blk, cr->len); in cram_decode_slice()
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/dports/biology/vt/vt-0.57721/lib/htslib/cram/ |
H A D | cram_io.h | 525 #define BLOCK_GROW(b,l) BLOCK_RESIZE((b), BLOCK_SIZE((b)) + (l)) macro 530 BLOCK_GROW((b),(l)); \ 538 BLOCK_GROW((b),1); \ 546 BLOCK_GROW((b),11); \
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H A D | cram_encode.c | 1943 BLOCK_GROW(s->aux_blk, aux_size*1.34+1); in cram_encode_aux_1_0() 2569 BLOCK_GROW(s->seqs_blk, cr->len+1); in process_one_read() 2570 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2850 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2854 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read()
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H A D | cram_decode.c | 2668 BLOCK_GROW(s->seqs_blk, cr->len); in cram_decode_slice() 2676 BLOCK_GROW(s->qual_blk, cr->len); in cram_decode_slice()
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H A D | cram_codecs.c | 1652 BLOCK_GROW(out, cp - cp_start); in cram_byte_array_stop_decode_block()
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/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/ |
H A D | cram_io.h | 525 #define BLOCK_GROW(b,l) BLOCK_RESIZE((b), BLOCK_SIZE((b)) + (l)) macro 530 BLOCK_GROW((b),(l)); \ 538 BLOCK_GROW((b),1); \ 546 BLOCK_GROW((b),11); \
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H A D | cram_encode.c | 1943 BLOCK_GROW(s->aux_blk, aux_size*1.34+1); in cram_encode_aux_1_0() 2569 BLOCK_GROW(s->seqs_blk, cr->len+1); in process_one_read() 2570 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2850 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2854 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read()
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H A D | cram_decode.c | 2668 BLOCK_GROW(s->seqs_blk, cr->len); in cram_decode_slice() 2676 BLOCK_GROW(s->qual_blk, cr->len); in cram_decode_slice()
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/dports/biology/stacks/stacks-2.4/htslib/cram/ |
H A D | cram_io.h | 517 #define BLOCK_GROW(b,l) BLOCK_RESIZE((b), BLOCK_SIZE((b)) + (l)) macro 522 BLOCK_GROW((b),(l)); \ 530 BLOCK_GROW((b),1); \ 538 BLOCK_GROW((b),11); \
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H A D | cram_encode.c | 1943 BLOCK_GROW(s->aux_blk, aux_size*1.34+1); in cram_encode_aux_1_0() 2585 BLOCK_GROW(s->seqs_blk, cr->len+1); in process_one_read() 2586 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2844 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2848 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read()
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H A D | cram_decode.c | 2651 BLOCK_GROW(s->seqs_blk, cr->len); in cram_decode_slice() 2659 BLOCK_GROW(s->qual_blk, cr->len); in cram_decode_slice()
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/dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/ |
H A D | cram_io.h | 479 #define BLOCK_GROW(b,l) BLOCK_RESIZE((b), BLOCK_SIZE((b)) + (l)) macro 484 BLOCK_GROW((b),(l)); \ 492 BLOCK_GROW((b),1); \ 500 BLOCK_GROW((b),11); \
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H A D | cram_encode.c | 2566 BLOCK_GROW(s->seqs_blk, cr->len+1); in process_one_read() 2567 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2831 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 2835 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read()
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H A D | cram_decode.c | 2790 BLOCK_GROW(s->seqs_blk, cr->len); in cram_decode_slice() 2798 BLOCK_GROW(s->qual_blk, cr->len); in cram_decode_slice()
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/dports/biology/py-pysam/pysam-0.18.0/htslib/cram/ |
H A D | cram_io.h | 279 #define BLOCK_GROW(b,l) if (block_grow((b),(l)) <0) goto block_err macro
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H A D | cram_encode.c | 2774 BLOCK_GROW(s->seqs_blk, cr->len+1); in process_one_read() 2775 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 3076 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 3080 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read()
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H A D | cram_decode.c | 2770 BLOCK_GROW(s->seqs_blk, cr->len); in cram_decode_slice() 2778 BLOCK_GROW(s->qual_blk, cr->len); in cram_decode_slice()
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/dports/biology/htslib/htslib-1.14/cram/ |
H A D | cram_io.h | 279 #define BLOCK_GROW(b,l) if (block_grow((b),(l)) <0) goto block_err macro
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H A D | cram_encode.c | 2774 BLOCK_GROW(s->seqs_blk, cr->len+1); in process_one_read() 2775 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 3076 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 3080 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read()
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H A D | cram_decode.c | 2770 BLOCK_GROW(s->seqs_blk, cr->len); in cram_decode_slice() 2778 BLOCK_GROW(s->qual_blk, cr->len); in cram_decode_slice()
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/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/ |
H A D | cram_io.h | 573 #define BLOCK_GROW(b,l) if (block_grow((b),(l)) <0) goto block_err macro
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H A D | cram_encode.c | 2089 BLOCK_GROW(s->aux_blk, aux_size*1.34+1); in cram_encode_aux_1_0() 2761 BLOCK_GROW(s->seqs_blk, cr->len+1); in process_one_read() 2762 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 3027 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read() 3031 BLOCK_GROW(s->qual_blk, cr->len); in process_one_read()
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H A D | cram_decode.c | 2643 BLOCK_GROW(s->seqs_blk, cr->len); in cram_decode_slice() 2651 BLOCK_GROW(s->qual_blk, cr->len); in cram_decode_slice()
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