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Searched refs:BlastTabularFileIn (Results 1 – 5 of 5) sorted by relevance

/dports/biology/seqan/seqan-library-2.4.0/include/seqan/blast/
H A Dblast_tabular_in.h127 using BlastTabularFileIn = FormattedFile<BlastTabular, Input, TBlastIOContext>; variable
155 atEnd(BlastTabularFileIn<TContext> & formattedFile) in atEnd()
222 onRecord(BlastTabularFileIn<TContext> & formattedFile) in onRecord()
896 BlastTabularFileIn<TContext> & formattedFile) in readRecord()
939 readHeader(BlastTabularFileIn<TContext> & formattedFile) in readHeader()
1003 readFooter(BlastTabularFileIn<TContext> & formattedFile) in readFooter()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/blast/
H A Dblast_tabular_in.h127 using BlastTabularFileIn = FormattedFile<BlastTabular, Input, TBlastIOContext>; variable
155 atEnd(BlastTabularFileIn<TContext> & formattedFile) in atEnd()
222 onRecord(BlastTabularFileIn<TContext> & formattedFile) in onRecord()
896 BlastTabularFileIn<TContext> & formattedFile) in readRecord()
939 readHeader(BlastTabularFileIn<TContext> & formattedFile) in readHeader()
1003 readFooter(BlastTabularFileIn<TContext> & formattedFile) in readFooter()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/demos/tutorial/blast_io/
H A Dread_assignment.cpp21 BlastTabularFileIn<TContext> file(argv[1]); in main()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/tests/blast/
H A Dtest_blast_input.h166 BlastTabularFileIn<TContext> fileIn(toCString(inPath)); in _testReadTabularWithoutComments()
372 BlastTabularFileIn<TContext> fileIn(toCString(inPath)); in _testReadTabularWithComments()
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/manual/source/Tutorial/InputOutput/
H A DBlastIO.rst186 :dox:`BlastTabularFileOut` and :dox:`BlastTabularFileIn`.
194 …dFile`: one of :dox:`BlastReportFileOut`, :dox:`BlastTabularFileOut` and :dox:`BlastTabularFileIn`.
223 Complete the above example by reading the file according to :dox:`BlastTabularFileIn`.