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Searched refs:COLLECT_ERROR_STATS (Results 1 – 7 of 7) sorted by relevance

/dports/biology/bbmap/bbmap/current/shared/
H A DReadStats.java133 if(COLLECT_ERROR_STATS){ in ReadStats()
253 if(COLLECT_ERROR_STATS){ in mergeAll()
1620 COLLECT_ERROR_STATS=false; in clear()
1652 public static boolean COLLECT_ERROR_STATS=false; field in ReadStats
1660 || COLLECT_ERROR_STATS || COLLECT_LENGTH_STATS || COLLECT_IDENTITY_STATS || COLLECT_TIME_STATS; in collectingStats()
H A DParser.java844 ReadStats.COLLECT_ERROR_STATS=(ReadStats.ERROR_HIST_FILE!=null); in parseHist()
845 …if(ReadStats.COLLECT_ERROR_STATS){System.err.println("Set error histogram output to "+ReadStats.ER… in parseHist()
/dports/biology/bbmap/bbmap/current/jgi/
H A DReformatReads.java543 final boolean MAKE_EHIST=ReadStats.COLLECT_ERROR_STATS; in process()
H A DSeal.java482 MAKE_EHIST=ReadStats.COLLECT_ERROR_STATS; in Seal()
H A DBBDuk2.java584 MAKE_EHIST=ReadStats.COLLECT_ERROR_STATS; in BBDuk2()
H A DBBDuk.java706 MAKE_EHIST=ReadStats.COLLECT_ERROR_STATS; in BBDuk()
/dports/biology/bbmap/bbmap/current/align2/
H A DAbstractMapThread.java415 final boolean MAKE_EHIST=(readstats==null ? false : ReadStats.COLLECT_ERROR_STATS); in run()