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Searched refs:CRAM_FREAD2 (Results 1 – 16 of 16) sorted by relevance

/dports/biology/vt/vt-0.57721/lib/htslib/cram/
H A Dcram_structs.h819 #define CRAM_FREAD2 8 macro
H A Dcram_io.c3966 if (i & CRAM_FREAD2) f |= BAM_FREAD2; in cram_init_tables()
3982 if (i & BAM_FREAD2) g |= CRAM_FREAD2; in cram_init_tables()
/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/
H A Dcram_structs.h832 #define CRAM_FREAD2 8 macro
H A Dcram_io.c4336 if (i & CRAM_FREAD2) f |= BAM_FREAD2; in cram_init_tables()
4352 if (i & BAM_FREAD2) g |= CRAM_FREAD2; in cram_init_tables()
/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/
H A Dcram_structs.h819 #define CRAM_FREAD2 8 macro
H A Dcram_io.c3988 if (i & CRAM_FREAD2) f |= BAM_FREAD2; in cram_init_tables()
4004 if (i & BAM_FREAD2) g |= CRAM_FREAD2; in cram_init_tables()
/dports/biology/stacks/stacks-2.4/htslib/cram/
H A Dcram_structs.h809 #define CRAM_FREAD2 8 macro
H A Dcram_io.c3917 if (i & CRAM_FREAD2) f |= BAM_FREAD2; in cram_init_tables()
3933 if (i & BAM_FREAD2) g |= CRAM_FREAD2; in cram_init_tables()
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/
H A Dcram_structs.h810 #define CRAM_FREAD2 8 macro
H A Dcram_io.c3915 if (i & CRAM_FREAD2) f |= BAM_FREAD2; in cram_init_tables()
3931 if (i & BAM_FREAD2) g |= CRAM_FREAD2; in cram_init_tables()
/dports/biology/py-pysam/pysam-0.18.0/htslib/cram/
H A Dcram_structs.h933 #define CRAM_FREAD2 8 macro
H A Dcram_io.c5075 if (i & CRAM_FREAD2) f |= BAM_FREAD2; in cram_init_tables()
5091 if (i & BAM_FREAD2) g |= CRAM_FREAD2; in cram_init_tables()
/dports/biology/htslib/htslib-1.14/cram/
H A Dcram_structs.h933 #define CRAM_FREAD2 8 macro
H A Dcram_io.c5075 if (i & CRAM_FREAD2) f |= BAM_FREAD2; in cram_init_tables()
5091 if (i & BAM_FREAD2) g |= CRAM_FREAD2; in cram_init_tables()
/dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/
H A Dcram_structs.h984 #define CRAM_FREAD2 8 macro
H A Dcram_io.c4671 if (i & CRAM_FREAD2) f |= BAM_FREAD2; in cram_init_tables()
4687 if (i & BAM_FREAD2) g |= CRAM_FREAD2; in cram_init_tables()