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Searched refs:CReportItem (Results 1 – 7 of 7) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/misc/discrepancy/
H A Ddiscrepancy.hpp85 class NCBI_DISCREPANCY_EXPORT CReportItem : public CObject class
93 virtual ~CReportItem(){} in ~CReportItem()
101 virtual vector<CRef<CReportItem> > GetSubitems() const = 0;
109 …static CRef<CReportItem> CreateReportItem(const string& test, const CReportObj& obj, const string&…
111 typedef vector<CRef<CReportItem> > TReportItemList;
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/misc/discrepancy/
H A Dsuspect_product_names.cpp259 …eFixSet, (CObject*)&*rule)).Severity(rule->IsFatal() ? CReportItem::eSeverity_error : CReportItem:…
262 …tObjRef(cds ? *cds : feat)).Severity(rule->IsFatal() ? CReportItem::eSeverity_error : CReportItem:…
411 …eFixSet, (CObject*)&*rule)).Severity(rule->IsFatal() ? CReportItem::eSeverity_error : CReportItem:…
414 …ontext.SeqFeatObjRef(feat)).Severity(rule->IsFatal() ? CReportItem::eSeverity_error : CReportItem:…
629 …dd(*context.StringObjRef()).Severity(rule->IsFatal() ? CReportItem::eSeverity_error : CReportItem:…
H A Dtext_output.cpp41 static bool ShowFatal(const CReportItem& item) in ShowFatal()
186 static string SevLevel[CReportItem::eSeverity_error + 1] = { "INFO", "WARNING", "FATAL" };
282 CReportItem::ESeverity max_sev = CReportItem::eSeverity_info; in OutputXML()
284 CReportItem::ESeverity s = it->GetSeverity(); in OutputXML()
H A Ddiscrepancy_core.cpp165 CRef<CReportItem> CReportNode::Export(CDiscrepancyCase& test, bool unique) const in Export()
171 CReportItem::ESeverity severity = m_Severity; in Export()
174 CRef<CReportItem> sub = it.second->Export(test, unique); in Export()
260 return CRef<CReportItem>(item); in Export()
279 CRef<CReportItem> CReportItem::CreateReportItem(const string& test, const CReportObj& obj, const st… in CreateReportItem()
294 return CRef<CReportItem>(item); in CreateReportItem()
492 out.push_back(CRef<CReportItem>(di)); in Collect()
H A Ddiscrepancy_core.hpp83 friend class CReportItem;
127 class CDiscrepancyItem : public CReportItem
164 friend class CReportItem;
189 CReportNode& Severity(CReportItem::ESeverity s) { m_Severity = s; return *this; } in Severity()
190 CReportNode& Fatal() { m_Severity = CReportItem::eSeverity_error; return *this; } in Fatal()
191 CReportNode& Info() { m_Severity = CReportItem::eSeverity_info; return *this; } in Info()
209 CRef<CReportItem> Export(CDiscrepancyCase& test, bool unique = true) const;
221 CReportItem::ESeverity m_Severity{ CReportItem::eSeverity_warning };
924 friend class CReportItem;
H A Dsequence_tests.cpp99 … tmp[kSomeIdenticalDeflines][kUniqueDeflines].Add(list).Severity(CReportItem::eSeverity_info); in DISCREPANCY_SUMMARIZE()
108 tmp[kAllUniqueDeflines].Severity(CReportItem::eSeverity_info); in DISCREPANCY_SUMMARIZE()
2024 …ences are circular"].Severity(m_Objs["F"].GetCount() ? CReportItem::eSeverity_error : CReportItem:… in DISCREPANCY_SUMMARIZE()
H A Dfeature_tests.cpp1298 …on[s] over the origin of circular DNA"].Severity(bad ? CReportItem::eSeverity_error : CReportItem:…