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Searched refs:CSingleExon (Results 1 – 4 of 4) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/
H A Dhmm.hpp349 class CSingleExon : public CExon class
352 ~CSingleExon() {} in ~CSingleExon()
353 CSingleExon(EStrand strn, int point, const CSeqScores& seqscr, const CExonParameters& params);
356 const CSingleExon* PrevExon() const { return static_cast<const CSingleExon*>(m_prevexon); } in PrevExon()
553 double BranchScore(const CSingleExon& next) const;
H A Dhmm.cpp175 CSingleExon::CSingleExon(EStrand strn, int point, const CSeqScores& seqscr, const CExonParameters& … in CSingleExon() function in CSingleExon
184 double CSingleExon::LengthScore() const in LengthScore()
189 double CSingleExon::TermScore() const in TermScore()
195 double CSingleExon::BranchScore(const CIntergenic&) const in BranchScore()
381 double CIntergenic::BranchScore(const CSingleExon& next) const in BranchScore()
H A Dparse.hpp66 vector<CSingleExon> m_seplus, m_seminus;
H A Dparse.cpp254 …n_params, EStrand strand, int point, vector<CIntergenic>& lvec, vector<CSingleExon>& rvec) … in s_MakeStep()
256 rvec.push_back(CSingleExon(strand, point, seqscr, exon_params)); in s_MakeStep()
370 m_seplus.push_back(CSingleExon(ePlus,0,m_seqscr,exon_params)); in CParse()