Home
last modified time | relevance | path

Searched refs:Cell_T (Results 1 – 7 of 7) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dintlist.c464 struct Cell_T { struct
471 struct Cell_T *x = (struct Cell_T *) a; in cell_ascending() argument
472 struct Cell_T *y = (struct Cell_T *) b; in cell_ascending()
485 struct Cell_T *x = (struct Cell_T *) a; in cell_ascending_dual()
486 struct Cell_T *y = (struct Cell_T *) b; in cell_ascending_dual()
503 struct Cell_T *x = (struct Cell_T *) a; in cell_descending()
504 struct Cell_T *y = (struct Cell_T *) b; in cell_descending()
526 cells = (struct Cell_T *) CALLOC(*n,sizeof(struct Cell_T)); in Intlist_array_ascending_by_key()
577 cells = (struct Cell_T *) CALLOC(n,sizeof(struct Cell_T)); in Intlist_list_ascending_by_key()
606 cells = (struct Cell_T *) CALLOC(n,sizeof(struct Cell_T)); in Intlist_list_descending_by_key()
[all …]
H A Dcellpool.c42 struct Cell_T *objectptr;
54 struct Cell_T *objectptr; in Cellpool_free_memory()
58 objectptr = (struct Cell_T *) List_head(p); in Cellpool_free_memory()
97 static struct Cell_T *
99 struct Cell_T *chunk; in add_new_objectchunk()
101 chunk = (struct Cell_T *) MALLOC_KEEP(CHUNKSIZE*sizeof(struct Cell_T)); in add_new_objectchunk()
153 Cell_T new; in Cellpool_push()
162 this->objectptr = (struct Cell_T *) p->first; in Cellpool_push()
199 Cellpool_pop (List_T list, Cell_T *x) { in Cellpool_pop()
204 *x = (Cell_T) list->first; in Cellpool_pop()
H A Dcellpool.h9 typedef struct Cell_T *Cell_T; typedef
10 struct Cell_T { struct
38 Cellpool_pop (List_T list, Cell_T *x); argument
H A Dstage2.c3149 typedef struct Cell_T *Cell_T;
3167 static Cell_T
3169 Cell_T new = (Cell_T) MALLOC(sizeof(*new));
3186 Cell_T x = * (Cell_T *) a; in Cell_interval_cmp()
3187 Cell_T y = * (Cell_T *) b; in Cell_interval_cmp()
3209 Cell_T x = * (Cell_T *) a; in Cell_rootposition_left_cmp()
3210 Cell_T y = * (Cell_T *) b; in Cell_rootposition_left_cmp()
3256 Cell_T x = * (Cell_T *) a; in Cell_rootposition_right_cmp()
3257 Cell_T y = * (Cell_T *) b; in Cell_rootposition_right_cmp()
3302 Cell_T x = * (Cell_T *) a; in Cell_score_cmp()
[all …]
H A Dsplicetrie_build.c778 struct Cell_T { struct
785 struct Cell_T x = * (struct Cell_T *) a; in Cell_position_cmp() argument
786 struct Cell_T y = * (struct Cell_T *) b; in Cell_position_cmp()
820 struct Cell_T *cells; in Splicetrie_retrieve_via_introns()
1158 cells = (struct Cell_T *) CALLOC(*nsplicesites,sizeof(struct Cell_T)); in Splicetrie_retrieve_via_introns()
1163 qsort(cells,*nsplicesites,sizeof(struct Cell_T),Cell_position_cmp); in Splicetrie_retrieve_via_introns()
H A Dsam_sort.c236 #define T Cell_T
/dports/biology/gmap/gmap-2020-09-12/
H A DChangeLog4611 * sarray-write.h, sarray-write.c: Using a list of Cell_T objects to compute
7067 uniqscan.c: Added Cellpool_T object to handle allocations of Cell_T in
27236 * cell.c, cell.h: Removed Cell_T, which was designed for the HashDB storage
28422 the second pass creates the hash table. This simplifies the Cell_T object