Searched refs:CountCommonKmers (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/cobalt/unit_test/ |
| H A D | kmer_unit_test.cpp | 124 BOOST_CHECK_EQUAL(CSparseKmerCounts::CountCommonKmers(counts, in BOOST_AUTO_TEST_CASE()
128 BOOST_CHECK_EQUAL((int)CSparseKmerCounts::CountCommonKmers(counts, in BOOST_AUTO_TEST_CASE()
132 BOOST_CHECK_EQUAL((int)CSparseKmerCounts::CountCommonKmers(counts, in BOOST_AUTO_TEST_CASE()
184 BOOST_CHECK_EQUAL(CSparseKmerCounts::CountCommonKmers(counts, counts2), in BOOST_AUTO_TEST_CASE()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/cobalt/ |
| H A D | kmercounts.cpp | 372 unsigned int num_common = CountCommonKmers(v1, v2, true); in FractionCommonKmersDist()
392 unsigned int num_common = CountCommonKmers(v1, v2, true); in FractionCommonKmersGlobalDist()
406 unsigned int CSparseKmerCounts::CountCommonKmers( in CountCommonKmers() function in CSparseKmerCounts
621 unsigned int num_common = CountCommonKmers(v1, v2); in FractionCommonKmersDist()
641 unsigned int num_common = CountCommonKmers(v1, v2); in FractionCommonKmersGlobalDist()
655 unsigned int CBinaryKmerCounts::CountCommonKmers( in CountCommonKmers() function in CBinaryKmerCounts
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/cobalt/ |
| H A D | kmercounts.hpp | 198 static unsigned int CountCommonKmers(const CSparseKmerCounts& v1,
355 static unsigned int CountCommonKmers(const CBinaryKmerCounts& v1,
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