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Searched refs:CountSortedSmallerU32 (Results 1 – 11 of 11) sorted by relevance

/dports/biology/plink/plink-ng-79b2df8c/2.0/
H A Dplink2_set.cc270 … range_first = CountSortedSmallerU32(&(variant_bps[chr_start]), chr_end - chr_start, range_first); in LoadIntervalBed()
271 …range_last = CountSortedSmallerU32(&(variant_bps[chr_start]), chr_end - chr_start, range_last + 1); in LoadIntervalBed()
H A Dplink2_fasta.cc45 …uint32_t offset = CountSortedSmallerU32(&(variant_bps[variant_uidx]), variant_uidx_last - variant_…
H A Dplink2_pvar.cc721 …const uint32_t par1_end = orig_x_start + CountSortedSmallerU32(&(variant_bps[orig_x_start]), orig_… in SplitPar()
722 …const uint32_t par2_start = par1_end + CountSortedSmallerU32(&(variant_bps[par1_end]), orig_x_end … in SplitPar()
H A Dplink2_common.h734 return CountSortedSmallerU32(&(cip->chr_fo_vidx_start[1]), cip->chr_ct, variant_uidx + 1); in GetVariantChrFoIdx()
H A Dplink2_cmdline.h370 uint32_t CountSortedSmallerU32(const uint32_t* sorted_u32_arr, uint32_t arr_length, uint32_t needle…
H A Dplink2_filter.cc167 …vidx_start += CountSortedSmallerU32(&(variant_bps[vidx_start]), chr_vidx_end - vidx_start, center_… in SnpFlag()
170 …const uint32_t vidx_end = vidx_start + CountSortedSmallerU32(&(variant_bps[vidx_start]), chr_vidx_… in SnpFlag()
H A Dplink2_cmdline.cc328 uint32_t CountSortedSmallerU32(const uint32_t* sorted_u32_arr, uint32_t arr_length, uint32_t needle… in CountSortedSmallerU32() function
H A Dplink2_glm.cc3371 …const uint32_t chr_fo_idx = CountSortedSmallerU32(&(subset_chr_fo_vidx_start[1]), cip->chr_ct, var… in GlmLogisticThread()
6508 …const uint32_t chr_fo_idx = CountSortedSmallerU32(&(subset_chr_fo_vidx_start[1]), cip->chr_ct, var… in GlmLinearThread()
8571 …const uint32_t chr_fo_idx = CountSortedSmallerU32(&(subset_chr_fo_vidx_start[1]), cip->chr_ct, var… in GlmLinearSubbatchThread()
H A Dplink2.cc615 …const uint32_t from_offset = CountSortedSmallerU32(&(variant_bps[variant_uidx_start]), variant_uid… in ApplyVariantBpFilters()
619 …const uint32_t to_offset = CountSortedSmallerU32(&(variant_bps[variant_uidx_start]), variant_uidx_… in ApplyVariantBpFilters()
H A Dplink2_data.cc5214 …const uint32_t chr_fo_idx = CountSortedSmallerU32(&(write_chr_fo_vidx_start[1]), cip->chr_ct, writ… in MakePgenThread()
H A Dplink2_misc.cc865 …const uint32_t incr = CountSortedSmallerU32(&(variant_bps[prev_chr_vidx_start]), arr_length, cur_b… in RecoverVarIds()