/dports/biology/ncbi-toolkit/ncbi/desktop/ |
H A D | import.h | 76 …rocLoad(OMPROC_EDIT,"Edit RgnFeat","Region",OBJ_SEQFEAT,FEATDEF_REGION,OBJ_SEQFEAT,FEATDEF_REGION,…
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H A D | import.c | 1524 if (subtype == FEATDEF_REGION) { in CreateRegionDialog() 1745 if (subtype == FEATDEF_REGION) { in CreateRegionOrCommentForm() 1960 subtype = FEATDEF_REGION; in RegionOrCommentGenFunc() 1967 if (subtype == FEATDEF_REGION) { in RegionOrCommentGenFunc()
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H A D | ingengraph.c | 1711 pClr[FEATDEF_REGION]=Ing_PutColor(210,154,14); /*orange*/ in Ing_BuildColorTable() 1781 Ing_FreeColor(pClr[FEATDEF_REGION]); in Ing_FreeColorTable()
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H A D | ingenwin.c | 1253 if (!IngfeatDefFilter[FEATDEF_REGION]){ in Ing_ShowComplexity() 1254 IngfeatDefTrack[FEATDEF_REGION]=2; in Ing_ShowComplexity() 1255 IngfeatDefFilter[FEATDEF_REGION]=TRUE; in Ing_ShowComplexity() 1267 IngfeatDefTrack[FEATDEF_REGION]=2; in Ing_ShowComplexity() 1271 …Ing_CreateNewFeature(igvp->entityID, igvp->itemID, NULL, SEQFEAT_IMP, FEATDEF_REGION, "low complex… in Ing_ShowComplexity()
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H A D | udvgraph.c | 451 pClr[FEATDEF_REGION]=GetColorRGB(210,154,14); /*orange*/ in UDV_BuildFeatColorTable()
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/dports/biology/ncbi-toolkit/ncbi/object/ |
H A D | objfdef.h | 294 #define FEATDEF_REGION 74 macro
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H A D | objfdef.c | 977 return FEATDEF_REGION; in FindFeatDefType()
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/dports/biology/ncbi-toolkit/ncbi/algo/blast/api/ |
H A D | blast_format.c | 1116 featureOrder[FEATDEF_REGION] = 1; in PHIBlastFormatResults() 1117 groupOrder[FEATDEF_REGION] = 1; in PHIBlastFormatResults()
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/dports/biology/ncbi-toolkit/ncbi/demo/ |
H A D | blastpgp.c | 1455 bop->featureOrder[FEATDEF_REGION] = 1; in PGPSeedSearch() 1456 bop->groupOrder[FEATDEF_REGION] = 1; in PGPSeedSearch()
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/dports/biology/ncbi-toolkit/ncbi/api/ |
H A D | asn2gnb4.c | 1432 { FEATDEF_REGION , FTQUAL_function }, 1433 { FEATDEF_REGION , FTQUAL_label }, 1434 { FEATDEF_REGION , FTQUAL_map }, 1435 { FEATDEF_REGION , FTQUAL_number }, 1436 { FEATDEF_REGION , FTQUAL_old_locus_tag }, 1437 { FEATDEF_REGION , FTQUAL_phenotype }, 1438 { FEATDEF_REGION , FTQUAL_product }, 1439 { FEATDEF_REGION , FTQUAL_standard_name }, 6768 if (featdeftype == FEATDEF_REGION) { in FormatFeatureBlockEx() 7922 if (format == GENPEPT_FMT && featdeftype == FEATDEF_REGION && isProt) { in FormatFeatureBlockEx()
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H A D | asn2gnb3.c | 6375 … if (featdeftype == FEATDEF_REGION || featdeftype == FEATDEF_BOND || featdeftype == FEATDEF_SITE) { in SetIfpFeatCount() 6481 if (pcontext.featdeftype == FEATDEF_REGION || in GetFeatsOnCdsProduct() 6490 if (awp->hideSitesBondsRegions && (pcontext.featdeftype == FEATDEF_REGION || in GetFeatsOnCdsProduct() 6496 } else if (awp->hideCddFeats && pcontext.featdeftype == FEATDEF_REGION && IsCDD (prt)) { in GetFeatsOnCdsProduct() 6664 if (prt->idx.subtype == FEATDEF_REGION || in GetRemoteFeatsOnCdsProduct() 6673 if (awp->hideSitesBondsRegions && (prt->idx.subtype == FEATDEF_REGION || in GetRemoteFeatsOnCdsProduct() 6679 } else if (awp->hideCddFeats && prt->idx.subtype == FEATDEF_REGION && IsCDD (prt)) { in GetRemoteFeatsOnCdsProduct() 6938 if (ISA_aa (bsp->mol) && fcontext->featdeftype == FEATDEF_REGION && in GetFeatsOnBioseq() 6940 if (awp->hideSitesBondsRegions && (fcontext->featdeftype == FEATDEF_REGION || in GetFeatsOnBioseq() 7457 sfp->idx.subtype != FEATDEF_REGION) { in GetFeatsOnBioseq()
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H A D | ddvcolor.c | 246 pClr[FEATDEF_REGION]=DDV_GetColorRGB(210,154,14); /*orange*/ in DDV_InitFeatureColors()
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H A D | salprop.c | 894 else if (sesp->itemsubtype == FEATDEF_REGION ) { in ApplyNewSeqFeat()
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H A D | macroapi.c | 1348 { Macro_feature_type_region , FEATDEF_REGION , "region" } , 8741 if (sfp->idx.subtype == FEATDEF_REGION in GetQualFromFeatureAnyType() 9098 if (sfp->idx.subtype == FEATDEF_REGION in RemoveQualFromFeatureAnyType() 9769 if (sfp->idx.subtype == FEATDEF_REGION in SetQualOnFeatureAnyType() 10094 if (sfp->idx.subtype == FEATDEF_REGION) { in GetFieldListFromFeature() 25327 { SEQFEAT_REGION, FEATDEF_REGION, SEQFEAT_IMP, FEATDEF_ANY, 25330 { SEQFEAT_REGION, FEATDEF_REGION, SEQFEAT_RNA, FEATDEF_ANY, 25351 { SEQFEAT_PROT, FEATDEF_mat_peptide_aa, SEQFEAT_REGION, FEATDEF_REGION, 25354 { SEQFEAT_PROT, FEATDEF_ANY, SEQFEAT_REGION, FEATDEF_REGION, 25357 { SEQFEAT_REGION, FEATDEF_REGION, SEQFEAT_PROT, FEATDEF_ANY, [all …]
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H A D | sqnutil3.c | 2340 { FEATDEF_REGION , "Region" }, 2526 } else if (type == FEATDEF_REGION || in FindKeyFromFeatDefType() 2754 if (context.featdeftype == FEATDEF_REGION && FeatIsCDD (sfp, &currscore)) { in BestCDDperBioseq() 2759 while (sfp != NULL && context.featdeftype == FEATDEF_REGION && in BestCDDperBioseq()
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H A D | valid.c | 19813 …featdeftype == FEATDEF_REGION || featdeftype == FEATDEF_misc_feature || featdeftype == FEATDEF_STS… in ValidateBioseqContextIndexed() 19885 … } else if (featdeftype == FEATDEF_REGION && DifferentDbxrefs (last->dbxref, sfp->dbxref)) { in ValidateBioseqContextIndexed()
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H A D | sqnutil1.c | 16089 case FEATDEF_REGION : in FindFeatFromFeatDefType()
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/dports/biology/ncbi-toolkit/ncbi/network/wwwblast/Src/ |
H A D | wwwbutl.c | 2826 f_order[FEATDEF_REGION] = 1; in PHIPrintOutput() 2827 g_order[FEATDEF_REGION] = 1; in PHIPrintOutput()
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/dports/biology/ncbi-toolkit/ncbi/sequin/ |
H A D | sequin5.c | 14267 { SEQFEAT_REGION, FEATDEF_REGION, SEQFEAT_IMP, FEATDEF_ANY, 14270 { SEQFEAT_REGION, FEATDEF_REGION, SEQFEAT_RNA, FEATDEF_misc_RNA, 14291 { SEQFEAT_PROT, FEATDEF_mat_peptide_aa, SEQFEAT_REGION, FEATDEF_REGION, 14294 { SEQFEAT_PROT, FEATDEF_sig_peptide_aa, SEQFEAT_REGION, FEATDEF_REGION, 14297 { SEQFEAT_PROT, FEATDEF_transit_peptide_aa, SEQFEAT_REGION, FEATDEF_REGION, 14309 { SEQFEAT_REGION, FEATDEF_REGION, SEQFEAT_PROT, FEATDEF_preprotein, 14318 { 0, FEATDEF_ANY, SEQFEAT_REGION, FEATDEF_REGION, 14493 || vnp_to->choice == FEATDEF_REGION)) in FeatureRemoveChangeNotify() 14663 if (site_or_bond_type == -1 && featdef_to != FEATDEF_REGION) in ConvertToBondSiteOrRegion() 14718 } else if (featdef_to == FEATDEF_REGION) { in ConvertToBondSiteOrRegion() [all …]
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