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Searched refs:Frag_Olap_Limit (Results 1 – 3 of 3) sorted by relevance

/dports/biology/canu/canu-2.2/src/overlapInCore/
H A DoverlapInCore-Process_String_Overlaps.C437 hit_limit = ((WA->A_Olaps_For_Frag >= G.Frag_Olap_Limit in Process_Matches()
440 (WA->B_Olaps_For_Frag >= G.Frag_Olap_Limit in Process_Matches()
616 if (ct <= G.Frag_Olap_Limit) { in Process_String_Olaps()
651 for (i = start; i < ct && WA->A_Olaps_For_Frag < G.Frag_Olap_Limit ; i ++) { in Process_String_Olaps()
671 for (i = start - 1; i >= 0 && WA->B_Olaps_For_Frag < G.Frag_Olap_Limit ; i --) { in Process_String_Olaps()
H A DoverlapInCore.H394 Frag_Olap_Limit = UINT64_MAX; in initialize()
447 uint64 Frag_Olap_Limit; // -l variable
H A DoverlapInCore.C316 G.Frag_Olap_Limit = strtol(argv[++arg], NULL, 10); in main()
317 if (G.Frag_Olap_Limit < 1) in main()
318 G.Frag_Olap_Limit = UINT64_MAX; in main()