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Searched refs:GENOME_BITS (Results 1 – 3 of 3) sorted by relevance

/dports/biology/gmap/gmap-2020-09-12/src/
H A Dgenome.h20 typedef enum {GENOME_OLIGOS, GENOME_BITS} Genometype_T; enumerator
H A Dgsnap.c3084 … Genome_new(transcriptomesubdir,transcriptome_fileroot,/*snps_root*/NULL,/*genometype*/GENOME_BITS, in worker_setup()
3090 genomebits = Genome_new(genomesubdir,genome_fileroot,/*alt_root*/NULL,/*genometype*/GENOME_BITS, in worker_setup()
3096 genomebits = Genome_new(genomesubdir,genome_fileroot,/*alt_root*/NULL,/*genometype*/GENOME_BITS, in worker_setup()
3100 …ts_alt = Genome_new(genomesubdir,genome_fileroot,/*alt_root*/masked_root,/*genometype*/GENOME_BITS, in worker_setup()
3113 … Genome_new(transcriptomesubdir,transcriptome_fileroot,/*snps_root*/NULL,/*genometype*/GENOME_BITS, in worker_setup()
3115 …nscriptomebits_alt = Genome_new(snpsdir,transcriptome_fileroot,snps_root,/*genometype*/GENOME_BITS, in worker_setup()
3121 genomebits = Genome_new(genomesubdir,genome_fileroot,/*alt_root*/NULL,/*genometype*/GENOME_BITS, in worker_setup()
3125 genomebits_alt = Genome_new(snpsdir,genome_fileroot,snps_root,/*genometype*/GENOME_BITS, in worker_setup()
H A Dgenome.c177 } else if (genometype == GENOME_BITS) {
239 } else if (genometype == GENOME_BITS) { in Genome_new()
276 } else if (genometype == GENOME_BITS) { in Genome_new()
299 } else if (genometype == GENOME_BITS) { in Genome_new()