| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/dbindex/ |
| H A D | sequence_istream_bdb.cpp | 50 db->GetAvailableMaskAlgorithms( ids ); in CheckBlastDBMaskAlgorithmId()
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/dbindex/ |
| H A D | sequence_istream_bdb.cpp | 50 db->GetAvailableMaskAlgorithms( ids ); in CheckBlastDBMaskAlgorithmId()
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/blast/seqdb_reader/ |
| H A D | seqdbgimask.hpp | 99 void GetAvailableMaskAlgorithms(vector <int> & algo) const { in GetAvailableMaskAlgorithms() function in CSeqDBGiMask
|
| H A D | seqdb.cpp | 1222 void CSeqDB::GetAvailableMaskAlgorithms(vector<int> & algorithms) in GetAvailableMaskAlgorithms() function in CSeqDB
1224 m_Impl->GetAvailableMaskAlgorithms(algorithms); in GetAvailableMaskAlgorithms()
1240 GetAvailableMaskAlgorithms(available_algo_ids); in ValidateMaskAlgorithms()
|
| H A D | seqdbimpl.hpp | 985 void GetAvailableMaskAlgorithms(vector<int> & algorithms);
|
| H A D | seqdbimpl.cpp | 2260 void CSeqDBImpl::GetAvailableMaskAlgorithms(vector<int> & algorithms) in GetAvailableMaskAlgorithms() function in CSeqDBImpl
2263 m_GiMask->GetAvailableMaskAlgorithms(algorithms); in GetAvailableMaskAlgorithms()
2299 GetAvailableMaskAlgorithms(algorithms); in GetAvailableMaskAlgorithmDescriptions()
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/blast/seqdb_reader/ |
| H A D | seqdbgimask.hpp | 99 void GetAvailableMaskAlgorithms(vector <int> & algo) const { in GetAvailableMaskAlgorithms() function in CSeqDBGiMask
|
| H A D | seqdb.cpp | 1222 void CSeqDB::GetAvailableMaskAlgorithms(vector<int> & algorithms) in GetAvailableMaskAlgorithms() function in CSeqDB
1224 m_Impl->GetAvailableMaskAlgorithms(algorithms); in GetAvailableMaskAlgorithms()
1240 GetAvailableMaskAlgorithms(available_algo_ids); in ValidateMaskAlgorithms()
|
| H A D | seqdbimpl.hpp | 985 void GetAvailableMaskAlgorithms(vector<int> & algorithms);
|
| H A D | seqdbimpl.cpp | 2260 void CSeqDBImpl::GetAvailableMaskAlgorithms(vector<int> & algorithms) in GetAvailableMaskAlgorithms() function in CSeqDBImpl
2263 m_GiMask->GetAvailableMaskAlgorithms(algorithms); in GetAvailableMaskAlgorithms()
2299 GetAvailableMaskAlgorithms(algorithms); in GetAvailableMaskAlgorithmDescriptions()
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/api/ |
| H A D | uniform_search.cpp | 308 m_SeqDb->GetAvailableMaskAlgorithms(supported_algorithms); in x_ValidateMaskingAlgorithm()
|
| H A D | seqsrc_seqdb.cpp | 728 datap->seqdb->GetAvailableMaskAlgorithms(supported_algorithms); in s_SeqDbSrcNew()
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/api/ |
| H A D | uniform_search.cpp | 308 m_SeqDb->GetAvailableMaskAlgorithms(supported_algorithms); in x_ValidateMaskingAlgorithm()
|
| H A D | seqsrc_seqdb.cpp | 728 datap->seqdb->GetAvailableMaskAlgorithms(supported_algorithms); in s_SeqDbSrcNew()
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/blast/seqdb_reader/ |
| H A D | seqdb.hpp | 1357 void GetAvailableMaskAlgorithms(vector<int> & algorithms);
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/blast/seqdb_reader/ |
| H A D | seqdb.hpp | 1357 void GetAvailableMaskAlgorithms(vector<int> & algorithms);
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/app/blastdb/ |
| H A D | makeblastdb.cpp | 630 m_Source->GetAvailableMaskAlgorithms(m_MaskIds); in CRawSeqDBSource()
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/blastdb/ |
| H A D | makeblastdb.cpp | 630 m_Source->GetAvailableMaskAlgorithms(m_MaskIds); in CRawSeqDBSource()
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/seqdb_reader/ |
| H A D | seqdb_unit_test.cpp | 3812 db.GetAvailableMaskAlgorithms(algos); in BOOST_AUTO_TEST_CASE()
3846 BOOST_REQUIRE_THROW(db.GetAvailableMaskAlgorithms(lst), CSeqDBException); in BOOST_AUTO_TEST_CASE()
3854 db.GetAvailableMaskAlgorithms(algos); in BOOST_AUTO_TEST_CASE()
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/seqdb_reader/ |
| H A D | seqdb_unit_test.cpp | 3813 db.GetAvailableMaskAlgorithms(algos); in BOOST_AUTO_TEST_CASE()
3847 BOOST_REQUIRE_THROW(db.GetAvailableMaskAlgorithms(lst), CSeqDBException); in BOOST_AUTO_TEST_CASE()
3855 db.GetAvailableMaskAlgorithms(algos); in BOOST_AUTO_TEST_CASE()
|