Searched refs:GetCoverageAnnot (Results 1 – 8 of 8) sorted by relevance
328 CRef<CSeq_annot> GetCoverageAnnot(void) const;329 CRef<CSeq_annot> GetCoverageAnnot(const string& annot_name) const;
562 CRef<CSeq_annot> GetCoverageAnnot(CRange<TSeqPos> range,565 CRef<CSeq_annot> GetCoverageAnnot(CRange<TSeqPos> range,
500 CRef<CSeq_annot> annot = it.GetCoverageAnnot(query_range); in Run()642 annot = seq.GetCoverageAnnot(range); in Run()
1215 CSNPDbSeqIterator::GetCoverageAnnot(CRange<TSeqPos> range, in GetCoverageAnnot() function in CSNPDbSeqIterator1228 CSNPDbSeqIterator::GetCoverageAnnot(CRange<TSeqPos> range, in GetCoverageAnnot() function in CSNPDbSeqIterator1231 return GetCoverageAnnot(range, kDefaultAnnotName, flags); in GetCoverageAnnot()
734 CRef<CSeq_annot> CCSraRefSeqIterator::GetCoverageAnnot(void) const in GetCoverageAnnot() function in CCSraRefSeqIterator742 CRef<CSeq_annot> CCSraRefSeqIterator::GetCoverageAnnot(const string& annot_name) const in GetCoverageAnnot() function in CCSraRefSeqIterator
829 if ( auto annot = it.GetCoverageAnnot(range, na_acc) ) { in x_LoadChunk()
1220 if ( auto annot = it.GetCoverageAnnot(range, graph_name) ) { in LoadAnnotChunk()
1274 .GetCoverageAnnot(m_File->GetAlignAnnotName()); in LoadRanges()