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Searched refs:GetLocation (Results 1 – 25 of 4849) sorted by relevance

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/dports/lang/mono/mono-5.10.1.57/mcs/mcs/
H A Dcs-parser.jay568 …lbag.AddLocation (current_container, GetLocation ($2), GetLocation ($5), GetLocation ($10), GetLoc…
748 lbag.AddLocation ($$, GetLocation ($2), GetLocation ($5), GetLocation ($6));
2378 lbag.AddLocation ($$, GetLocation ($2), GetLocation ($3), GetLocation ($4), GetLocation ($7));
2440 lbag.AddLocation ($$, GetLocation ($1), GetLocation ($2), GetLocation ($4), GetLocation ($7));
2463 lbag.AddLocation ($$, GetLocation ($1), GetLocation ($2), GetLocation ($4), GetLocation ($7));
2576 lbag.AddLocation ($$, GetLocation ($1), GetLocation ($3), GetLocation ($6));
2586 lbag.AddLocation ($$, GetLocation ($1), GetLocation ($3), GetLocation ($6));
5321 lbag.AddLocation ($$, GetLocation ($1), GetLocation ($4), GetLocation ($5));
5335 lbag.AddLocation ($$, GetLocation ($1), GetLocation ($2), GetLocation ($5), GetLocation ($6));
6451 lbag.AddStatement ($$, GetLocation ($3), GetLocation ($4), GetLocation ($6), GetLocation ($7));
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/misc/discrepancy/
H A Doverlapping_features.cpp54 const CSeq_loc& loc_i = cds[i]->GetLocation();
99 const CSeq_loc& loc = cds.GetLocation(); in DISCREPANCY_AUTOFIX()
108 const CSeq_loc& loc_t = f->GetLocation(); in DISCREPANCY_AUTOFIX()
140 br_loc->Assign(new_cds->GetLocation()); in DISCREPANCY_AUTOFIX()
248 const CSeq_loc& loc_i = rnas[i]->GetLocation();
312 const CSeq_loc& loc_i = rrnas[i]->GetLocation();
335 const CSeq_loc& loc_i = genes[i]->GetLocation();
460 a = A->GetLocation().GetStop(eExtreme_Positional); in less()
461 b = B->GetLocation().GetStop(eExtreme_Positional); in less()
519 …if (ff->GetLocation().GetStart(eExtreme_Positional) <= g1 && ff->GetLocation().GetStop(eExtreme_Po…
[all …]
H A Dfeature_tests.cpp246 const CSeq_loc& loc = gene->GetLocation();
291 const CSeq_loc& loc_i = genes[i]->GetLocation();
619 …GetLocation().GetStart(eExtreme_Positional) == cds.GetLocation().GetStart(eExtreme_Positional) && … in ExtendToGapsOrEnds()
824 …if (is_mrna || feat.GetLocation().GetStart(eExtreme_Biological) == gene.GetLocation().GetStart(eEx… in IsPartialStartConflict()
837 …if (is_mrna || feat.GetLocation().GetStop(eExtreme_Biological) == gene.GetLocation().GetStop(eExtr… in IsPartialStopConflict()
986 const CSeq_loc& loc_j = feats[j]->GetLocation();
1228 if (feat.GetLocation().IsMix() || feat.GetLocation().IsPacked_int()) {
1266 if (feat.GetLocation().IsMix() || feat.GetLocation().IsPacked_int()) {
1359 CSeq_loc_CI li(feat.GetLocation());
2131 const CSeq_loc& loc_i = cds[i]->GetLocation();
[all …]
/dports/devel/include-what-you-use/include-what-you-use-clang_11/
H A Diwyu_location_util.h172 inline clang::SourceLocation GetLocation(const clang::Token& token) { in GetLocation() function
176 inline clang::SourceLocation GetLocation(clang::SourceLocation loc) { in GetLocation() function
179 clang::SourceLocation GetLocation(const clang::Decl* decl);
180 clang::SourceLocation GetLocation(const clang::Stmt* stmt);
181 clang::SourceLocation GetLocation(const clang::TypeLoc* typeloc);
182 clang::SourceLocation GetLocation(const clang::NestedNameSpecifierLoc* nnsloc);
183 clang::SourceLocation GetLocation(const clang::TemplateArgumentLoc* argloc);
189 return GetFileEntry(GetLocation(obj)); in GetFileEntry()
204 const clang::FullSourceLoc a_loc(GetLocation(a), *GlobalSourceManager()); in IsBeforeInTranslationUnit()
205 const clang::FullSourceLoc b_loc(GetLocation(b), *GlobalSourceManager()); in IsBeforeInTranslationUnit()
H A Diwyu_location_util.cc64 SourceLocation GetLocation(const clang::Decl* decl) { in GetLocation() function
120 SourceLocation GetLocation(const clang::Stmt* stmt) { in GetLocation() function
154 SourceLocation GetLocation(const clang::TypeLoc* typeloc) { in GetLocation() function
159 SourceLocation GetLocation(const clang::NestedNameSpecifierLoc* nnsloc) { in GetLocation() function
164 SourceLocation GetLocation(const clang::TemplateArgumentLoc* argloc) { in GetLocation() function
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/unit_test/
H A Dunit_test_cds_fix.cpp330 BOOST_CHECK_EQUAL(sequence::Compare(cds->GetLocation(), mrna->GetLocation(), in BOOST_AUTO_TEST_CASE()
345 BOOST_CHECK_EQUAL(sequence::Compare(cds->GetLocation(), mrna->GetLocation(), in BOOST_AUTO_TEST_CASE()
349 …BOOST_CHECK_EQUAL(mrna->GetLocation().GetStop(eExtreme_Biological), utr3->GetLocation().GetStop(eE… in BOOST_AUTO_TEST_CASE()
360 BOOST_CHECK_EQUAL(sequence::Compare(cds->GetLocation(), mrna->GetLocation(), in BOOST_AUTO_TEST_CASE()
364 …BOOST_CHECK_EQUAL(mrna->GetLocation().GetStart(eExtreme_Biological), utr5->GetLocation().GetStart(… in BOOST_AUTO_TEST_CASE()
365 …BOOST_CHECK_EQUAL(mrna->GetLocation().GetStop(eExtreme_Biological), utr3->GetLocation().GetStop(eE… in BOOST_AUTO_TEST_CASE()
377 BOOST_CHECK_EQUAL(sequence::Compare(mrna2->GetLocation(), mrna->GetLocation(), in BOOST_AUTO_TEST_CASE()
512 BOOST_CHECK_EQUAL(cds->GetLocation().GetStop(eExtreme_Biological), 23); in BOOST_AUTO_TEST_CASE()
521 BOOST_CHECK_EQUAL(cds->GetLocation().GetStop(eExtreme_Biological), 27); in BOOST_AUTO_TEST_CASE()
530 BOOST_CHECK_EQUAL(cds->GetLocation().GetStop(eExtreme_Biological), 31); in BOOST_AUTO_TEST_CASE()
[all …]
H A Dunit_test_gap_trim.cpp123 BOOST_CHECK_EQUAL(adjusted_feats.front()->GetLocation().GetStart(eExtreme_Positional), 0); in TestTrimMiscOnRight()
124 BOOST_CHECK_EQUAL(adjusted_feats.front()->GetLocation().GetStop(eExtreme_Positional), 11); in TestTrimMiscOnRight()
142 BOOST_CHECK_EQUAL(adjusted_feats.front()->GetLocation().GetStart(eExtreme_Positional), 22); in TestTrimMiscOnLeft()
143 BOOST_CHECK_EQUAL(adjusted_feats.front()->GetLocation().GetStop(eExtreme_Positional), 33); in TestTrimMiscOnLeft()
161 BOOST_CHECK_EQUAL(adjusted_feats.front()->GetLocation().GetStart(eExtreme_Positional), 0); in TestSplitMisc()
162 BOOST_CHECK_EQUAL(adjusted_feats.front()->GetLocation().GetStop(eExtreme_Positional), 11); in TestSplitMisc()
165 BOOST_CHECK_EQUAL(adjusted_feats.back()->GetLocation().GetStart(eExtreme_Positional), 22); in TestSplitMisc()
166 BOOST_CHECK_EQUAL(adjusted_feats.back()->GetLocation().GetStop(eExtreme_Positional), 33); in TestSplitMisc()
313 CSeq_entry_Handle seh = scope.GetBioseqHandle(cds.GetLocation()).GetTopLevelEntry(); in TestUpdateCDS()
855 cb->SetLoc().SetInt().SetId().Assign(*(cpy->GetLocation().GetId())); in AddCodeBreak()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/misc/hgvs/
H A Dvariation_util.cpp188 const CSeq_id* id1 = vr1.GetLocation().GetId(); in CheckExonBoundary()
237 aggregate_loc->Add(vr.GetLocation()); in s_FactorOutLocsInPlace()
246 if(vr.IsSetLocation() && vr.GetLocation().Equals(v.GetLocation())) { in s_FactorOutLocsInPlace()
261 vr.SetLocation().Assign(v.GetLocation()); in s_PropagateLocsInPlace()
470 vr.SetLocation().Assign(feat->GetLocation()); in Remap()
471 if(!vr.GetLocation().GetId()) { in Remap()
500 ext_loc->SetLocation().Assign(vr.GetLocation()); in Remap()
503 s_Remap(vr, *mapper, vr.GetLocation()); in Remap()
505 if(vr.GetLocation().GetId() in Remap()
509 s_ResolveIntronicOffsets(vr, vr.GetLocation()); in Remap()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/import/ftable/
H A Dgff3_annot_assembler.cpp133 pExistingCds->GetLocation(), pFeature->GetLocation()); in xProcessFeatureCds()
137 auto cdsStrand = pExistingCds->GetLocation().GetStrand(); in xProcessFeatureCds()
142 pExistingCds->GetLocation().GetStart(eExtreme_Positional); in xProcessFeatureCds()
144 pFeature->GetLocation().GetStart(eExtreme_Positional); in xProcessFeatureCds()
151 pExistingCds->GetLocation().GetStart(eExtreme_Positional); in xProcessFeatureCds()
153 pFeature->GetLocation().GetStart(eExtreme_Positional); in xProcessFeatureCds()
198 pFeature->GetLocation(), pExon->GetLocation()); in xProcessFeatureRna()
217 pParentRna->SetLocation().Assign(pFeature->GetLocation()); in xProcessFeatureExon()
222 pParentRna->GetLocation(), pFeature->GetLocation()); in xProcessFeatureExon()
/dports/games/spring/spring_98.0/rts/Rendering/Shaders/
H A DShader.cpp279 us->SetType(GetUniformType(us->GetLocation())); in GetNewUniformState()
516 …ssert(IsBound()); if (uState->Set(v0 )) glUniform1i(uState->GetLocation(), v0 … in SetUniform()
517 …ssert(IsBound()); if (uState->Set(v0 )) glUniform1f(uState->GetLocation(), v0 … in SetUniform()
518 …ssert(IsBound()); if (uState->Set(v0, v1 )) glUniform2i(uState->GetLocation(), v0, v1 … in SetUniform()
519 …ssert(IsBound()); if (uState->Set(v0, v1 )) glUniform2f(uState->GetLocation(), v0, v1 … in SetUniform()
525 …t int* v) { assert(IsBound()); if (uState->Set2v(v)) glUniform2iv(uState->GetLocation(), 1, v); } in SetUniform2v()
526 …t float* v) { assert(IsBound()); if (uState->Set2v(v)) glUniform2fv(uState->GetLocation(), 1, v); } in SetUniform2v()
527 …t int* v) { assert(IsBound()); if (uState->Set3v(v)) glUniform3iv(uState->GetLocation(), 1, v); } in SetUniform3v()
528 …t float* v) { assert(IsBound()); if (uState->Set3v(v)) glUniform3fv(uState->GetLocation(), 1, v); } in SetUniform3v()
529 …t int* v) { assert(IsBound()); if (uState->Set4v(v)) glUniform4iv(uState->GetLocation(), 1, v); } in SetUniform4v()
[all …]
H A DShader.h103 return GetUniformState(name)->GetLocation(); in GetUniformLocation()
140 …virtual void SetUniform(UniformState* uState, int v0) { SetUniform1i(uState->GetLocation(), v0);… in SetUniform()
141 …virtual void SetUniform(UniformState* uState, float v0) { SetUniform1f(uState->GetLocation(), v0);… in SetUniform()
142 …tUniform(UniformState* uState, int v0, int v1) { SetUniform2i(uState->GetLocation(), v0, v1); } in SetUniform()
143 …tUniform(UniformState* uState, float v0, float v1) { SetUniform2f(uState->GetLocation(), v0, v1); } in SetUniform()
149 …oid SetUniform2v(UniformState* uState, const int* v) { SetUniform2iv(uState->GetLocation(), v); } in SetUniform2v()
150 …oid SetUniform2v(UniformState* uState, const float* v) { SetUniform2fv(uState->GetLocation(), v); } in SetUniform2v()
151 …oid SetUniform3v(UniformState* uState, const int* v) { SetUniform3iv(uState->GetLocation(), v); } in SetUniform3v()
152 …oid SetUniform3v(UniformState* uState, const float* v) { SetUniform3fv(uState->GetLocation(), v); } in SetUniform3v()
153 …oid SetUniform4v(UniformState* uState, const int* v) { SetUniform4iv(uState->GetLocation(), v); } in SetUniform4v()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/validator/
H A Dfeature_match.cpp117 … if (TestForOverlapEx(cds.GetLocation(), mrna.GetLocation(), overlap_type, scope) >= 0) { in s_SetUpXrefPairs()
149 m_pos_start = m_feat->GetLocation().GetStart(eExtreme_Positional); in CMatchFeat()
150 m_pos_stop = m_feat->GetLocation().GetStop(eExtreme_Positional); in CMatchFeat()
179 TSeqPos mrna_start = m_feat->GetLocation().GetStart(eExtreme_Biological); in MatchesUnderlyingCDS()
180 TSeqPos mrna_stop = m_feat->GetLocation().GetStop(eExtreme_Biological); in MatchesUnderlyingCDS()
184 if (m_Cds->GetLocation().GetStart(eExtreme_Biological) == mrna_start) { in MatchesUnderlyingCDS()
192 if (m_Cds->GetLocation().GetStop(eExtreme_Biological) == mrna_stop) { in MatchesUnderlyingCDS()
236 TSeqPos mrna_start = m_feat->GetLocation().GetStart(eExtreme_Biological); in MatchAnyUnderlyingCDS()
237 TSeqPos mrna_stop = m_feat->GetLocation().GetStop(eExtreme_Biological); in MatchAnyUnderlyingCDS()
243 if ((*cds_it)->GetFeat().GetLocation().GetStart(eExtreme_Biological) == mrna_start) { in MatchAnyUnderlyingCDS()
[all …]
H A Dsplice_problems.cpp261 const CSeq_loc& loc = feat.GetLocation(); in CalculateSpliceProblems()
343 const CSeq_loc& loc = feat.GetLocation(); in ValidateSpliceExon()
361 overlap_feat_start = mrna->GetLocation().GetStart(eExtreme_Biological); in ValidateSpliceExon()
364 overlap_feat_stop = mrna->GetLocation().GetStop(eExtreme_Biological); in ValidateSpliceExon()
379 overlap_feat_stop = gene->GetLocation().GetStop(eExtreme_Biological); in ValidateSpliceExon()
448 const CSeq_loc& loc = feat.GetLocation(); in ValidateSpliceMrna()
463 if (!cds->GetLocation().IsPartialStart(eExtreme_Biological) in ValidateSpliceMrna()
464 …&& cds->GetLocation().GetStart(eExtreme_Biological) == feat.GetLocation().GetStart(eExtreme_Biolog… in ValidateSpliceMrna()
467 if (!cds->GetLocation().IsPartialStop(eExtreme_Biological) in ValidateSpliceMrna()
468 …&& cds->GetLocation().GetStop(eExtreme_Biological) == feat.GetLocation().GetStop(eExtreme_Biologic… in ValidateSpliceMrna()
[all …]
/dports/emulators/dolphin-emu/dolphin-3152428/Source/Android/jni/
H A DNativeConfig.cpp19 static Config::Location GetLocation(JNIEnv* env, jstring file, jstring section, jstring key) in GetLocation() function
89 const Config::Location location = GetLocation(env, file, section, key); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_isSettingSaveable()
123 const Config::Location location = GetLocation(env, file, section, key); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_isOverridden()
132 const Config::Location location = GetLocation(env, file, section, key); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_deleteKey()
141 const Config::Location location = GetLocation(env, file, section, key); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_getString()
150 const Config::Location location = GetLocation(env, file, section, key); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_getBoolean()
158 return Get(layer, GetLocation(env, file, section, key), default_value); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_getInt()
166 return Get(layer, GetLocation(env, file, section, key), default_value); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_getFloat()
173 return Set(layer, GetLocation(env, file, section, key), GetJString(env, value)); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_setString()
186 return Set(layer, GetLocation(env, file, section, key), value); in Java_org_dolphinemu_dolphinemu_features_settings_model_NativeConfig_setInt()
[all …]
/dports/editors/lazarus/lazarus/components/lazdebuggergdbmi/test/
H A Dtestbreakpoint.pas320 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
337 if (dbg.State = dsPause) and (dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC)
339 if (dbg.State = dsPause) and (dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC)
346 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
387 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
413 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC_NEST
428 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
470 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
496 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
532 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
[all …]
/dports/editors/lazarus-devel/lazarus-6df7e8756882f7d7f28f662011ee72f21746c580/components/lazdebuggergdbmi/test/
H A Dtestbreakpoint.pas320 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
337 if (dbg.State = dsPause) and (dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC)
339 if (dbg.State = dsPause) and (dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC)
346 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
387 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
413 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC_NEST
428 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
470 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
496 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
532 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
[all …]
/dports/editors/lazarus-qt5/lazarus/components/lazdebuggergdbmi/test/
H A Dtestbreakpoint.pas320 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
337 if (dbg.State = dsPause) and (dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC)
339 if (dbg.State = dsPause) and (dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC)
346 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
387 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
413 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC_NEST
428 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
470 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
496 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
532 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
[all …]
/dports/editors/lazarus-qt5-devel/lazarus-6df7e8756882f7d7f28f662011ee72f21746c580/components/lazdebuggergdbmi/test/
H A Dtestbreakpoint.pas320 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
337 if (dbg.State = dsPause) and (dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC)
339 if (dbg.State = dsPause) and (dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC)
346 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
387 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
413 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC_NEST
428 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
470 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
496 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
532 if dbg.GetLocation.SrcLine <> BREAK_LINE_FOOFUNC
[all …]
/dports/sysutils/vector/vector-0.10.0/cargo-crates/wabt-sys-0.7.1/wabt/src/
H A Dbinary-reader-ir.cc246 Location GetLocation() const;
328 expr->loc = GetLocation(); in AppendExpr()
585 Var start(func_index, GetLocation()); in OnStartFunction()
737 if_expr->true_.end_loc = GetLocation(); in OnElseExpr()
1140 Location loc = GetLocation(); in OnInitExprF32ConstExpr()
1147 Location loc = GetLocation(); in OnInitExprF64ConstExpr()
1154 Location loc = GetLocation(); in OnInitExprV128ConstExpr()
1162 Location loc = GetLocation(); in OnInitExprGlobalGetExpr()
1169 Location loc = GetLocation(); in OnInitExprI32ConstExpr()
1176 Location loc = GetLocation(); in OnInitExprI64ConstExpr()
[all …]
/dports/www/firefox/firefox-99.0/third_party/wasm2c/src/
H A Dbinary-reader-ir.cc285 Location GetLocation() const;
375 expr->loc = GetLocation(); in AppendExpr()
641 Var start(func_index, GetLocation()); in OnStartFunction()
1400 Location loc = GetLocation(); in OnInitExprF32ConstExpr()
1407 Location loc = GetLocation(); in OnInitExprF64ConstExpr()
1414 Location loc = GetLocation(); in OnInitExprV128ConstExpr()
1422 Location loc = GetLocation(); in OnInitExprGlobalGetExpr()
1429 Location loc = GetLocation(); in OnInitExprI32ConstExpr()
1436 Location loc = GetLocation(); in OnInitExprI64ConstExpr()
1443 Location loc = GetLocation(); in OnInitExprRefNull()
[all …]
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/test/schema/
H A Dwb-test-schema-parser.cpp73 REQUIRE_EQ ( string ( loc . m_file ), string ( t . GetLocation () . m_file ) ); in TEST_CASE()
74 REQUIRE_EQ ( loc . m_line, t . GetLocation () . m_line ); in TEST_CASE()
75 REQUIRE_EQ ( loc . m_column, t . GetLocation () . m_column ); in TEST_CASE()
141 REQUIRE_EQ ( string (), string ( source . GetLocation() . m_file ) ); in TEST_CASE()
142 REQUIRE_EQ ( 0u, source . GetLocation() . m_line ); in TEST_CASE()
143 REQUIRE_EQ ( 0u, source . GetLocation() . m_column ); in TEST_CASE()
148 … REQUIRE_EQ ( string ( "file" ), string ( source . GetLocation() . m_file ) ); // first real token in TEST_CASE()
149 REQUIRE_EQ ( 1u, source . GetLocation() . m_line ); in TEST_CASE()
150 REQUIRE_EQ ( 2u, source . GetLocation() . m_column ); in TEST_CASE()
155 REQUIRE_EQ ( 1u, source . GetLocation() . m_line ); in TEST_CASE()
[all …]
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/test/schema/
H A Dwb-test-schema-parser.cpp73 REQUIRE_EQ ( string ( loc . m_file ), string ( t . GetLocation () . m_file ) ); in TEST_CASE()
74 REQUIRE_EQ ( loc . m_line, t . GetLocation () . m_line ); in TEST_CASE()
75 REQUIRE_EQ ( loc . m_column, t . GetLocation () . m_column ); in TEST_CASE()
141 REQUIRE_EQ ( string (), string ( source . GetLocation() . m_file ) ); in TEST_CASE()
142 REQUIRE_EQ ( 0u, source . GetLocation() . m_line ); in TEST_CASE()
143 REQUIRE_EQ ( 0u, source . GetLocation() . m_column ); in TEST_CASE()
148 … REQUIRE_EQ ( string ( "file" ), string ( source . GetLocation() . m_file ) ); // first real token in TEST_CASE()
149 REQUIRE_EQ ( 1u, source . GetLocation() . m_line ); in TEST_CASE()
150 REQUIRE_EQ ( 2u, source . GetLocation() . m_column ); in TEST_CASE()
155 REQUIRE_EQ ( 1u, source . GetLocation() . m_line ); in TEST_CASE()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/
H A Dcds_fix.cpp117 int dna_len = sequence::GetLength(cds.GetLocation(), &scope); in GetLastPartialCodonLength()
144 const CSeq_loc& cds_loc = cds.GetLocation(); in GetLastCodonLoc()
311 if (cds.GetLocation().IsPartialStop(eExtreme_Biological)) { in SetTranslExcept()
375 bool partial3 = cds.GetLocation().IsPartialStop(eExtreme_Biological); in AdjustProteinMolInfoToMatchCDS()
402 bool partial3 = cds.GetLocation().IsPartialStop(eExtreme_Biological); in AdjustProteinFeaturePartialsToMatchCDS()
529 const CSeq_loc& cd_loc = cds.GetLocation(); in MakemRNAforCDS()
564 loc->Assign(new_mrna->GetLocation()); in MakemRNAforCDS()
606 overlap_loc = &gene->GetLocation(); in MakemRNAforCDS()
657 …new_mrna->SetPartial(new_mrna->GetLocation().IsPartialStart(eExtreme_Positional) || new_mrna->GetL… in MakemRNAforCDS()
678 CBioseq_Handle bsh = scope.GetBioseqHandle(cds.GetLocation()); in GetmRNAforCDS()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/
H A Dcds_fix.cpp117 int dna_len = sequence::GetLength(cds.GetLocation(), &scope); in GetLastPartialCodonLength()
144 const CSeq_loc& cds_loc = cds.GetLocation(); in GetLastCodonLoc()
311 if (cds.GetLocation().IsPartialStop(eExtreme_Biological)) { in SetTranslExcept()
375 bool partial3 = cds.GetLocation().IsPartialStop(eExtreme_Biological); in AdjustProteinMolInfoToMatchCDS()
402 bool partial3 = cds.GetLocation().IsPartialStop(eExtreme_Biological); in AdjustProteinFeaturePartialsToMatchCDS()
529 const CSeq_loc& cd_loc = cds.GetLocation(); in MakemRNAforCDS()
564 loc->Assign(new_mrna->GetLocation()); in MakemRNAforCDS()
606 overlap_loc = &gene->GetLocation(); in MakemRNAforCDS()
657 …new_mrna->SetPartial(new_mrna->GetLocation().IsPartialStart(eExtreme_Positional) || new_mrna->GetL… in MakemRNAforCDS()
678 CBioseq_Handle bsh = scope.GetBioseqHandle(cds.GetLocation()); in GetmRNAforCDS()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/read_blast_result/
H A Dlocations.cpp130 return (*gen_feature)->GetLocation(); in getGenomicLocation()
168 if(! (*gen_feature)->GetLocation().GetInt().CanGetStrand() ) continue; in hasGenomicInterval()
169 if(! (*gen_feature)->GetLocation().GetInt().GetId().IsLocal() ) continue; in hasGenomicInterval()
189 if(! (*gen_feature)->GetLocation().GetInt().CanGetStrand() ) continue; in getGenomicInterval()
190 if(! (*gen_feature)->GetLocation().GetInt().GetId().IsLocal() ) continue; in getGenomicInterval()
191 return (*gen_feature)->GetLocation().GetInt(); in getGenomicInterval()
230 return GetLocationString(f.GetLocation()); in GetLocationString()

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