Searched refs:LENGTH_HIST_FILE (Results 1 – 2 of 2) sorted by relevance
792 …_HIST_FILE, BASE_HIST_FILE, QUAL_ACCURACY_FILE, INDEL_HIST_FILE, ERROR_HIST_FILE, LENGTH_HIST_FILE, in testFiles()813 if(LENGTH_HIST_FILE!=null){rs.writeLengthToFile(LENGTH_HIST_FILE);} in writeAll()1636 LENGTH_HIST_FILE=null; in clear()1677 public static String LENGTH_HIST_FILE=null; field in ReadStats
847 …ReadStats.LENGTH_HIST_FILE=(b==null || b.equalsIgnoreCase("null") || b.equalsIgnoreCase("none")) ?… in parseHist()848 ReadStats.COLLECT_LENGTH_STATS=(ReadStats.LENGTH_HIST_FILE!=null); in parseHist()849 …CT_LENGTH_STATS){System.err.println("Set length histogram output to "+ReadStats.LENGTH_HIST_FILE);} in parseHist()