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Searched refs:LabelQV (Results 1 – 10 of 10) sorted by relevance

/dports/biology/pbbam/pbbam-0.18.0/tests/src/cram/
H A Dpbmerge_pacbio_ordering.t.in18 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
28 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
110 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
111 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
197 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
198 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
284 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
285 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
375 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
376 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
H A Dpbmerge_mixed_ordering.t.in17 …SubstitutionTag=st;Ipd:Frames=ip;PulseWidth:Frames=pw;PkMid=pm;PkMean=pa;LabelQV=pq;AltLabel=pt;Al…
/dports/biology/pbbam/pbbam-0.18.0/tests/src/
H A Dtest_WhitelistedZmwReadStitcher.cpp69 EXPECT_EQ(b1.LabelQV(), b2.LabelQV()); in Compare()
H A Dtest_ZmwReadStitcher.cpp70 EXPECT_EQ(b1.LabelQV(), b2.LabelQV()); in Compare()
H A Dtest_BamRecord.cpp583 … { return b.LabelQV(orientation, aligned, exciseSoftClips, pulseBehavior).Fastq(); } in CheckPulseQualityTags()
/dports/biology/pbbam/pbbam-0.18.0/src/
H A DVirtualZmwBamRecord.cpp116 if (b.HasLabelQV()) MoveAppend(std::move(b.LabelQV()), labelQv); in StitchSources()
217 if (!labelQv.empty()) this->LabelQV(labelQv); in StitchSources()
H A DBamRecord.cpp610 internal::ClipPulse(LabelQV(Orientation::NATIVE), p2bCache, clipFrom, clipLength) in ClipTags()
1523 QualityValues BamRecord::LabelQV(Orientation orientation, bool aligned, bool exciseSoftClips, in LabelQV() function in PacBio::BAM::BamRecord
1530 BamRecord& BamRecord::LabelQV(const QualityValues& labelQVs) in LabelQV() function in PacBio::BAM::BamRecord
/dports/biology/pbbam/pbbam-0.18.0/include/pbbam/internal/
H A DBamRecordView.inl46 { return record_.LabelQV(orientation_, aligned_, exciseSoftClips_, pulseBehavior_); }
/dports/biology/pbbam/pbbam-0.18.0/include/pbbam/
H A DBamRecord.h496 QualityValues LabelQV(Orientation orientation = Orientation::NATIVE, bool aligned = false,
913 BamRecord& LabelQV(const QualityValues& labelQVs);
/dports/biology/pbbam/pbbam-0.18.0/
H A DCHANGELOG.md446 - LabelQV()