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Searched refs:LnProbTK02LogNormal (Results 1 – 5 of 5) sorted by relevance

/dports/biology/mrbayes/MrBayes-3.2.7/src/
H A Dproposal.c1290 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[q->index], nu*oldRLength, tk02Rate[r->index]); in Move_AddBranch()
1291 … (*lnPriorRatio) += LnProbTK02LogNormal (tk02Rate[q->index], nu* p->length, tk02Rate[p->index]); in Move_AddBranch()
1292 … (*lnPriorRatio) += LnProbTK02LogNormal (tk02Rate[q->index], nu* r->length, tk02Rate[r->index]); in Move_AddBranch()
1519 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[q->index], nu*oldPLength, tk02Rate[p->index]); in Move_DelBranch()
1520 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[q->index], nu*oldRLength, tk02Rate[r->index]); in Move_DelBranch()
1521 … (*lnPriorRatio) += LnProbTK02LogNormal (tk02Rate[q->index], nu* r->length, tk02Rate[r->index]); in Move_DelBranch()
6531 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[u->index], nu*oldALength, tk02Rate[a->index]); in Move_LocalClock()
6533 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[u->index], nu*oldBLength, tk02Rate[b->index]); in Move_LocalClock()
6535 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[v->index], nu*oldCLength, tk02Rate[c->index]); in Move_LocalClock()
6536 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[v->index], nu*oldULength, tk02Rate[u->index]); in Move_LocalClock()
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H A Dbest.c1604 …(*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[p->index], nu*oldLeftLength, tk02Rate[p->left->in… in Move_NodeSliderGeneTree()
1605 …(*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[p->index], nu*oldRightLength, tk02Rate[p->right->… in Move_NodeSliderGeneTree()
1606 …(*lnPriorRatio) += LnProbTK02LogNormal (tk02Rate[p->index], nu*p->left->length, tk02Rate[p->left->… in Move_NodeSliderGeneTree()
1607 …(*lnPriorRatio) += LnProbTK02LogNormal (tk02Rate[p->index], nu*p->right->length, tk02Rate[p->right… in Move_NodeSliderGeneTree()
1611 …(*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[p->anc->index], nu*oldPLength, tk02Rate[p->index]… in Move_NodeSliderGeneTree()
1612 …(*lnPriorRatio) += LnProbTK02LogNormal (tk02Rate[p->anc->index], nu*p->length, tk02Rate[p->index]); in Move_NodeSliderGeneTree()
H A Dutils.h269 MrBFlt LnProbTK02LogNormal (MrBFlt mean, MrBFlt var, MrBFlt x);
H A Dutils.c13074 MrBFlt LnProbTK02LogNormal (MrBFlt mean, MrBFlt var, MrBFlt x) in LnProbTK02LogNormal() function
H A Dmcmc.c8262 … lnPrior += LnProbTK02LogNormal (st[branch->anc->index], nu*branch->length, st[branch->index]); in LogPrior()