Searched refs:MASK_SOFT (Results 1 – 10 of 10) sorted by relevance
64 #define MASK_SOFT 2 macro
268 } else if ((opt_qmask == MASK_SOFT) && (opt_hardmask)) { in maskfasta()322 } else if ((opt_qmask == MASK_SOFT) && (opt_hardmask)) { in fastx_mask()
293 else if ((opt_qmask == MASK_SOFT) && (opt_hardmask)) in search_query()645 } else if ((opt_dbmask == MASK_SOFT) && (opt_hardmask)) { in search_prep()
367 else if ((opt_qmask == MASK_SOFT) && (opt_hardmask)) in search_exact_query()694 } else if ((opt_dbmask == MASK_SOFT) && (opt_hardmask)) { in search_exact_prep()
171 } else if ((opt_dbmask == MASK_SOFT) && (opt_hardmask)) { in orient()
669 } else if ((opt_qmask == MASK_SOFT) && (opt_hardmask)) { in allpairs_global()
1730 } else if ((opt_dbmask == MASK_SOFT) && (opt_hardmask)) { in chimera()1756 } else if ((opt_qmask == MASK_SOFT) && (opt_hardmask)) { in chimera()
849 } else if ((opt_dbmask == MASK_SOFT) && (opt_hardmask)) { in udb_make()
1221 } else if ((opt_qmask == MASK_SOFT) && (opt_hardmask)) { in cluster()
1757 opt_qmask = MASK_SOFT; in args_init()1770 opt_dbmask = MASK_SOFT; in args_init()