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Searched refs:MSAAlloc (Results 1 – 12 of 12) sorted by relevance

/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/hmm2/src/hmmer2/
H A Dmsa.cpp61 MSAAlloc(int nseq, int alen) in MSAAlloc() function
309 newMSA = MSAAlloc(nnew, 0); in MSASmallerAlignment()
H A Dfuncs.h180 extern MSA *MSAAlloc(int nseq, int alen);
H A Dtrace.cpp460 msa = MSAAlloc(nseq, alen); in P7Traces2Alignment()
/dports/biology/clustal-omega/clustal-omega-1.2.4/src/squid/
H A Da2m.c50 msa = MSAAlloc(10, 0); in ReadA2M()
H A Dphylip.c101 msa = MSAAlloc(nseq, 0); in ReadPhylip()
H A Dmsa.h242 extern MSA *MSAAlloc(int nseq, int alen);
H A Dclustal.c135 msa = MSAAlloc(10, 0); in ReadClustal()
H A Dmsf.c101 msa = MSAAlloc(10, 0); in ReadMSF()
H A Dstockholm.c101 msa = MSAAlloc(10, 0); in ReadStockholm()
188 msa = MSAAlloc(10, 0); in ReadDublin()
H A Dmsa.c60 MSAAlloc(int nseq, int alen) in MSAAlloc() function
1113 msa = MSAAlloc(ainfo->nseq, ainfo->alen); in MSAFromAINFO()
1393 new = MSAAlloc(nnew, 0); in MSASmallerAlignment()
/dports/biology/clustal-omega/clustal-omega-1.2.4/src/clustal/
H A Dseq.c102 msa = MSAAlloc(prMSeq->nseqs, in AliStat()
915 msa = MSAAlloc(mseq->nseqs, alen); in WriteAlignment()
/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/hmm2/src/u_build/
H A DHMMBuildDialogController.cpp360 msa_struct *msa = MSAAlloc(ma->getNumRows(), ma->getLength()); in _run()